RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 TULP2O00295 520 aa11.98□□□□□ -0.49
APTX-216ENST00000472896 MX1P20591 662 aa11.98□□□□□ -0.49
APTX-216ENST00000472896 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
APTX-216ENST00000472896 DGKZQ13574 1117 aa11.98□□□□□ -0.49
APTX-216ENST00000472896 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
APTX-216ENST00000472896 GLIS2Q9BZE0 524 aaPredicted RBP11.98□□□□□ -0.49
APTX-216ENST00000472896 RGL2O15211 777 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 CELF2O95319 508 aaKnown RBP11.97□□□□□ -0.49
APTX-216ENST00000472896 MCM10Q7L590 875 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 DCTPP1Q9H773 170 aa11.97□□□□□ -0.49
APTX-216ENST00000472896 ERC2O15083 957 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.49
APTX-216ENST00000472896 CXCL9Q07325 125 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 DLK2Q6UY11 383 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 KIF18AQ8NI77 898 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 TMX3Q96JJ7 454 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
APTX-216ENST00000472896 FAM53CQ9NYF3 392 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.49
APTX-216ENST00000472896 ABCC4O15439 1325 aa11.96□□□□□ -0.5
APTX-216ENST00000472896 CA12O43570 354 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 AOC3Q16853 763 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 C17orf53Q8N3J3 647 aaPredicted RBP11.95□□□□□ -0.5
APTX-216ENST00000472896 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
APTX-216ENST00000472896 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 MCCP23508 829 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 GMPSP49915 693 aaPredicted RBP11.95□□□□□ -0.5
APTX-216ENST00000472896 ANAPC15P60006 121 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
APTX-216ENST00000472896 ZNF397Q8NF99 534 aaPredicted RBP11.95□□□□□ -0.5
APTX-216ENST00000472896 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 KCNF1Q9H3M0 494 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 ZNF408Q9H9D4 720 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 PYCARDQ9ULZ3 195 aa11.95□□□□□ -0.5
APTX-216ENST00000472896 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
APTX-216ENST00000472896 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
APTX-216ENST00000472896 PPIP5K2O43314 1243 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 IGSF3O75054 1194 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 GPTP24298 496 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 UBE2HP62256 183 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
APTX-216ENST00000472896 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
APTX-216ENST00000472896 VGLL3A8MV65 326 aa11.93□□□□□ -0.5
APTX-216ENST00000472896 ERVV-1B6SEH8 477 aa11.93□□□□□ -0.5
APTX-216ENST00000472896 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
APTX-216ENST00000472896 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
APTX-216ENST00000472896 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
APTX-216ENST00000472896 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
APTX-216ENST00000472896 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
APTX-216ENST00000472896 SDSP20132 328 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 SOX10P56693 466 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 POTEHQ6S545 545 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 CCDC112Q8NEF3 446 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 TRPM4Q8TD43 1214 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 ZNRF3Q9ULT6 936 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 GADD45BO75293 160 aaPredicted RBP11.92□□□□□ -0.5
APTX-216ENST00000472896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.92□□□□□ -0.5
APTX-216ENST00000472896 ZNF34Q8IZ26 560 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
APTX-216ENST00000472896 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
APTX-216ENST00000472896 NUP98P52948 1817 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 RAD17O75943 681 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 NTSR2O95665 410 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 NEK4P51957 841 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
APTX-216ENST00000472896 RPAP2Q8IXW5 612 aaPredicted RBP11.91□□□□□ -0.5
APTX-216ENST00000472896 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
APTX-216ENST00000472896 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
APTX-216ENST00000472896 ATP6V1DQ9Y5K8 247 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 RIC1Q4ADV7 1423 aa11.91□□□□□ -0.5
APTX-216ENST00000472896 PDE4DIPQ5VU43 2346 aa11.9□□□□□ -0.5
APTX-216ENST00000472896 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
APTX-216ENST00000472896 CDC37L1Q7L3B6 337 aa11.9□□□□□ -0.5
APTX-216ENST00000472896 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
APTX-216ENST00000472896 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
APTX-216ENST00000472896 TNNT1P13805 278 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 HUNKP57058 714 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms