RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 NOB1Q9ULX3 412 aaKnown RBP11.34□□□□□ -0.59
USF1-204ENST00000472217 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
USF1-204ENST00000472217 GYG1P46976 350 aa11.33□□□□□ -0.6
USF1-204ENST00000472217 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
USF1-204ENST00000472217 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
USF1-204ENST00000472217 NOGQ13253 232 aa11.33□□□□□ -0.6
USF1-204ENST00000472217 PRAMEF18Q5VWM3 479 aa11.33□□□□□ -0.6
USF1-204ENST00000472217 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
USF1-204ENST00000472217 JAG2Q9Y219 1238 aa11.33□□□□□ -0.6
USF1-204ENST00000472217 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 F8W031 263 aaPredicted RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 FKBP1AP62942 108 aaKnown RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 FKBP1BP68106 108 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 METTL24Q5JXM2 366 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 POTEDQ86YR6 584 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 MIER1Q8N108 512 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 API5Q9BZZ5 524 aaKnown RBP11.32□□□□□ -0.6
USF1-204ENST00000472217 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 PCDHAC2Q9Y5I4 1007 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 FAM205AQ6ZU69 1335 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
USF1-204ENST00000472217 CAPN15O75808 1086 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 PDE8BO95263 885 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 SLC10A3P09131 477 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
USF1-204ENST00000472217 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
USF1-204ENST00000472217 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
USF1-204ENST00000472217 MOB2Q70IA6 237 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
USF1-204ENST00000472217 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
USF1-204ENST00000472217 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 CA12O43570 354 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
USF1-204ENST00000472217 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 MFSD14BQ5SR56 506 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 RASAL3Q86YV0 1011 aa11.3□□□□□ -0.6
USF1-204ENST00000472217 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
USF1-204ENST00000472217 COL1A1P02452 1464 aaPredicted RBP11.3□□□□□ -0.6
USF1-204ENST00000472217 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 EYA2O00167 538 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
USF1-204ENST00000472217 VPS37DQ86XT2 251 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
USF1-204ENST00000472217 MEIS3Q99687 375 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
USF1-204ENST00000472217 AOX1Q06278 1338 aa11.29□□□□□ -0.6
USF1-204ENST00000472217 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 CLRN2A0PK11 232 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 FGFR2P21802 821 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 NF2P35240 595 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 BCAMP50895 628 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
USF1-204ENST00000472217 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
USF1-204ENST00000472217 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
USF1-204ENST00000472217 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
USF1-204ENST00000472217 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
USF1-204ENST00000472217 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
USF1-204ENST00000472217 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
USF1-204ENST00000472217 MYO1BO43795 1136 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
USF1-204ENST00000472217 BCAR3O75815 825 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
USF1-204ENST00000472217 TRIM27P14373 513 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
USF1-204ENST00000472217 PRKG1Q13976 671 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 GRIK5Q16478 980 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 SIL1Q9H173 461 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 VEZTQ9HBM0 779 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 SERPINA10Q9UK55 444 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
USF1-204ENST00000472217 CIAO1O76071 339 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 SLC5A1P13866 664 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 LPIN2Q92539 896 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
USF1-204ENST00000472217 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 SAGE1Q9NXZ1 904 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 FZD1Q9UP38 647 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
USF1-204ENST00000472217 HDAC5Q9UQL6 1122 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
USF1-204ENST00000472217 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
USF1-204ENST00000472217 GNAI3P08754 354 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 CRKP46108 304 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 ATF7IPQ6VMQ6 1270 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 496.5 ms