RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
NCKIPSD-209ENST00000470006 UBE3BQ7Z3V4 1068 aa24.35■■□□□ 1.49
NCKIPSD-209ENST00000470006 ARMC5Q96C12 935 aa24.35■■□□□ 1.49
NCKIPSD-209ENST00000470006 CWF19L2Q2TBE0 894 aaKnown RBP24.34■■□□□ 1.49
NCKIPSD-209ENST00000470006 CD209Q9NNX6 404 aa24.34■■□□□ 1.49
NCKIPSD-209ENST00000470006 PCDHAC2Q9Y5I4 1007 aa24.34■■□□□ 1.49
NCKIPSD-209ENST00000470006 ITGA6P23229 1130 aa24.33■■□□□ 1.49
NCKIPSD-209ENST00000470006 RBM5P52756 815 aaKnown RBP eCLIP24.33■■□□□ 1.49
NCKIPSD-209ENST00000470006 SLC4A8Q2Y0W8 1093 aa24.33■■□□□ 1.49
NCKIPSD-209ENST00000470006 CFAP100Q494V2 611 aa24.33■■□□□ 1.49
NCKIPSD-209ENST00000470006 NBPF12Q5TAG4 269 aaPredicted RBP24.33■■□□□ 1.49
NCKIPSD-209ENST00000470006 UNCXA6NJT0 531 aa24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 ARHGEF6Q15052 776 aa24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 NBPF11Q86T75 865 aa24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 ANKRD13AQ8IZ07 590 aa24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 COLQQ9Y215 455 aaPredicted RBP24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 SSC5DA1L4H1 1573 aa24.32■■□□□ 1.48
NCKIPSD-209ENST00000470006 ECM29Q5VYK3 1845 aa24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 MYCP01106 439 aaPredicted RBP24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 GJA5P36382 358 aa24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 CHRNDQ07001 517 aa24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 SLC9C1Q4G0N8 1177 aa24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 MTMR14Q8NCE2 650 aa24.31■■□□□ 1.48
NCKIPSD-209ENST00000470006 NEURL1BA8MQ27 555 aa24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 USP2O75604 605 aaPredicted RBP24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 CERS5Q8N5B7 392 aa24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 PTPN18Q99952 460 aa24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 STK31Q9BXU1 1019 aa24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 ELP3Q9H9T3 547 aa24.3■■□□□ 1.48
NCKIPSD-209ENST00000470006 PRMT6Q96LA8 375 aaPredicted RBP24.29■■□□□ 1.48
NCKIPSD-209ENST00000470006 BRCA2P51587 3418 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 SPDYE2BA6NHP3 402 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 H7C1W4 665 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 APAF1O14727 1248 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 TAF5LO75529 589 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 SPDYE6P0CI01 402 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 RASA3Q14644 834 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 OPTNQ96CV9 577 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 ZNF333Q96JL9 665 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 JAG2Q9Y219 1238 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 CEP290O15078 2479 aa24.28■■□□□ 1.48
NCKIPSD-209ENST00000470006 LAMB1P07942 1786 aa24.27■■□□□ 1.48
NCKIPSD-209ENST00000470006 SNAP23O00161 211 aa24.27■■□□□ 1.48
NCKIPSD-209ENST00000470006 ZNF804AQ7Z570 1209 aa24.27■■□□□ 1.48
NCKIPSD-209ENST00000470006 HELBQ8NG08 1087 aaPredicted RBP24.27■■□□□ 1.48
NCKIPSD-209ENST00000470006 PTCH2Q9Y6C5 1203 aa24.27■■□□□ 1.48
NCKIPSD-209ENST00000470006 CAP1Q01518 475 aa24.26■■□□□ 1.47
NCKIPSD-209ENST00000470006 TAF1CQ15572 869 aaPredicted RBP24.26■■□□□ 1.47
NCKIPSD-209ENST00000470006 TSPYL6Q8N831 410 aa24.26■■□□□ 1.47
NCKIPSD-209ENST00000470006 ZFYVE28Q9HCC9 887 aa24.26■■□□□ 1.47
NCKIPSD-209ENST00000470006 ANKRD18BA2A2Z9 1011 aa24.25■■□□□ 1.47
NCKIPSD-209ENST00000470006 TESPA1A2RU30 521 aaPredicted RBP24.25■■□□□ 1.47
NCKIPSD-209ENST00000470006 TNFAIP1Q13829 316 aa24.24■■□□□ 1.47
NCKIPSD-209ENST00000470006 GCKRQ14397 625 aa24.24■■□□□ 1.47
NCKIPSD-209ENST00000470006 PLA2G12BQ9BX93 195 aa24.24■■□□□ 1.47
NCKIPSD-209ENST00000470006 CHMP3Q9Y3E7 222 aa24.24■■□□□ 1.47
NCKIPSD-209ENST00000470006 CCL15-CCL14A0A0B4J2E2 113 aa24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 WDHD1O75717 1129 aaPredicted RBP24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 CCL15Q16663 113 aa24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 MYH16Q9H6N6 1097 aa24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 AOX1Q06278 1338 aa24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 TRIOBPQ9H2D6 2365 aa24.23■■□□□ 1.47
NCKIPSD-209ENST00000470006 H0YGN5 161 aa24.22■■□□□ 1.47
NCKIPSD-209ENST00000470006 GTF2A2P52657 109 aa24.22■■□□□ 1.47
NCKIPSD-209ENST00000470006 DDX10Q13206 875 aaKnown RBP24.22■■□□□ 1.47
NCKIPSD-209ENST00000470006 PLIN1O60240 522 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 CSF1RP07333 972 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 IL1R1P14778 569 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 FKBP1AP62942 108 aaKnown RBP24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 KIF22Q14807 665 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 G2E3Q7L622 706 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 CNKSR2Q8WXI2 1034 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 BRI3BPQ8WY22 251 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 MS4A4AQ96JQ5 239 aa24.21■■□□□ 1.47
NCKIPSD-209ENST00000470006 OTOFQ9HC10 1997 aa24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 IFIT5Q13325 482 aaKnown RBP24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 SH3TC2Q8TF17 1288 aa24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 ZNF70Q9UC06 446 aaPredicted RBP24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 CSADQ9Y600 493 aa24.2■■□□□ 1.46
NCKIPSD-209ENST00000470006 C15orf52Q6ZUT6 534 aaKnown RBP24.19■■□□□ 1.46
NCKIPSD-209ENST00000470006 TSR2Q969E8 191 aaKnown RBP24.19■■□□□ 1.46
NCKIPSD-209ENST00000470006 OTUD5Q96G74 571 aa24.19■■□□□ 1.46
NCKIPSD-209ENST00000470006 TDRD3Q9H7E2 651 aaKnown RBP24.19■■□□□ 1.46
NCKIPSD-209ENST00000470006 TCP10L2B9ZVM9 353 aa24.18■■□□□ 1.46
NCKIPSD-209ENST00000470006 MAP3K9P80192 1104 aa24.18■■□□□ 1.46
NCKIPSD-209ENST00000470006 FAM43AQ8N2R8 423 aa24.18■■□□□ 1.46
NCKIPSD-209ENST00000470006 TTF2Q9UNY4 1162 aaKnown RBP24.18■■□□□ 1.46
NCKIPSD-209ENST00000470006 IRS2Q9Y4H2 1338 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 ECM2O94769 699 aaPredicted RBP24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 VGLL4Q14135 290 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 SPDYE2Q495Y8 402 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 TAF7LQ5H9L4 462 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 CHRDL2Q6WN34 429 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 DPF3Q92784 378 aa24.17■■□□□ 1.46
NCKIPSD-209ENST00000470006 TNNI2P48788 182 aa24.16■■□□□ 1.46
NCKIPSD-209ENST00000470006 CASP7P55210 303 aa24.16■■□□□ 1.46
NCKIPSD-209ENST00000470006 FKBP5Q13451 457 aaPredicted RBP24.16■■□□□ 1.46
NCKIPSD-209ENST00000470006 MFSD14BQ5SR56 506 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms