RNA–Protein interactions for RNA: ENST00000469663.1

PARP1-206, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-206ENST00000469663 CCDC152Q4G0S7 254 aa13.84□□□□□ -0.19
PARP1-206ENST00000469663 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
PARP1-206ENST00000469663 MYOZ2Q9NPC6 264 aa13.84□□□□□ -0.19
PARP1-206ENST00000469663 SEC31BQ9NQW1 1179 aa13.84□□□□□ -0.19
PARP1-206ENST00000469663 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 GMLQ99445 158 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 XDHP47989 1333 aa13.83□□□□□ -0.2
PARP1-206ENST00000469663 USP17L3A6NCW0 530 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 USP17L4A6NCW7 530 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 PDE8AO60658 829 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
PARP1-206ENST00000469663 DSG2Q14126 1118 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 USP17L1Q7RTZ2 530 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 ANKRD18AQ8IVF6 992 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
PARP1-206ENST00000469663 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
PARP1-206ENST00000469663 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
PARP1-206ENST00000469663 NOM1Q5C9Z4 860 aaKnown RBP13.81□□□□□ -0.2
PARP1-206ENST00000469663 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
PARP1-206ENST00000469663 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
PARP1-206ENST00000469663 PCDHGA4Q9Y5G9 962 aa13.81□□□□□ -0.2
PARP1-206ENST00000469663 NF2P35240 595 aa13.8□□□□□ -0.2
PARP1-206ENST00000469663 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
PARP1-206ENST00000469663 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
PARP1-206ENST00000469663 MYD88Q99836 296 aa13.8□□□□□ -0.2
PARP1-206ENST00000469663 MBIPQ9NS73 344 aa13.8□□□□□ -0.2
PARP1-206ENST00000469663 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
PARP1-206ENST00000469663 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
PARP1-206ENST00000469663 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 TBC1D8O95759 1140 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 TM4SF4P48230 202 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 MMP14P50281 582 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
PARP1-206ENST00000469663 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
PARP1-206ENST00000469663 MOB2Q70IA6 237 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 OGFOD1Q8N543 542 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
PARP1-206ENST00000469663 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
PARP1-206ENST00000469663 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
PARP1-206ENST00000469663 MYH3P11055 1940 aa13.78□□□□□ -0.2
PARP1-206ENST00000469663 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
PARP1-206ENST00000469663 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
PARP1-206ENST00000469663 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
PARP1-206ENST00000469663 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
PARP1-206ENST00000469663 GPR25O00155 361 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 ZNF646O15015 1829 aaPredicted RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 TBC1D12O60347 775 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 DDX58O95786 925 aaKnown RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 FBXO46Q6PJ61 603 aaPredicted RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 CFHR5Q9BXR6 569 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
PARP1-206ENST00000469663 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 SCAF8Q9UPN6 1271 aaKnown RBP13.77□□□□□ -0.21
PARP1-206ENST00000469663 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
PARP1-206ENST00000469663 WNT10BO00744 389 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 NUDT7P0C024 238 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 CTSWP56202 376 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
PARP1-206ENST00000469663 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 STRIP1Q5VSL9 837 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 ADAMTS8Q9UP79 889 aa13.76□□□□□ -0.21
PARP1-206ENST00000469663 FKTNO75072 461 aa13.75□□□□□ -0.21
PARP1-206ENST00000469663 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
PARP1-206ENST00000469663 GNAI1P63096 354 aa13.75□□□□□ -0.21
PARP1-206ENST00000469663 APOBEC3FQ8IUX4 373 aaKnown RBP13.75□□□□□ -0.21
PARP1-206ENST00000469663 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
PARP1-206ENST00000469663 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
PARP1-206ENST00000469663 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
PARP1-206ENST00000469663 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
PARP1-206ENST00000469663 ALDH1A1P00352 501 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
PARP1-206ENST00000469663 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
PARP1-206ENST00000469663 SASH1O94885 1247 aa13.73□□□□□ -0.21
PARP1-206ENST00000469663 PTPN12Q05209 780 aaKnown RBP13.73□□□□□ -0.21
PARP1-206ENST00000469663 ZNF687Q8N1G0 1237 aa13.73□□□□□ -0.21
PARP1-206ENST00000469663 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
PARP1-206ENST00000469663 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
PARP1-206ENST00000469663 GREM2Q9H772 168 aa13.73□□□□□ -0.21
PARP1-206ENST00000469663 MAP3K2Q9Y2U5 619 aa13.73□□□□□ -0.21
PARP1-206ENST00000469663 COL1A1P02452 1464 aaPredicted RBP13.73□□□□□ -0.21
PARP1-206ENST00000469663 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms