RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SCARF1Q14162 830 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 DEFB115Q30KQ5 88 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 TLL2Q9Y6L7 1015 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 THSD7BQ9C0I4 1608 aa18.03■□□□□ 0.48
COL27A1-203ENST00000468565 PITPNM2Q9BZ72 1349 aa18.03■□□□□ 0.48
COL27A1-203ENST00000468565 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-203ENST00000468565 HDAC9Q9UKV0 1011 aa18.03■□□□□ 0.48
COL27A1-203ENST00000468565 SASH1O94885 1247 aa18.02■□□□□ 0.48
COL27A1-203ENST00000468565 HIBADHP31937 336 aaKnown RBP18.02■□□□□ 0.48
COL27A1-203ENST00000468565 SULF1Q8IWU6 871 aa18.02■□□□□ 0.48
COL27A1-203ENST00000468565 TDRD7Q8NHU6 1098 aaKnown RBP18.02■□□□□ 0.48
COL27A1-203ENST00000468565 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
COL27A1-203ENST00000468565 ASTN2O75129 1339 aaPredicted RBP18.02■□□□□ 0.47
COL27A1-203ENST00000468565 FAM205AQ6ZU69 1335 aa18.02■□□□□ 0.47
COL27A1-203ENST00000468565 CIAO1O76071 339 aa18.02■□□□□ 0.47
COL27A1-203ENST00000468565 GYG1P46976 350 aa18.02■□□□□ 0.47
COL27A1-203ENST00000468565 VEGFBP49765 207 aa18.02■□□□□ 0.47
COL27A1-203ENST00000468565 ANGEL2Q5VTE6 544 aaKnown RBP18.02■□□□□ 0.47
COL27A1-203ENST00000468565 KIAA0825Q8IV33 1275 aa18.02■□□□□ 0.47
COL27A1-203ENST00000468565 CERS5Q8N5B7 392 aa18.01■□□□□ 0.47
COL27A1-203ENST00000468565 ADM5C9JUS6 153 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
COL27A1-203ENST00000468565 FBXO33Q7Z6M2 555 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
COL27A1-203ENST00000468565 WNT10BO00744 389 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 FGFR2P21802 821 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 MTX1Q13505 466 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 ATG9AQ7Z3C6 839 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 SAPCD2Q86UD0 394 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 COPRSQ9NQ92 184 aa18■□□□□ 0.47
COL27A1-203ENST00000468565 NBPF9Q3BBW0 867 aa17.99■□□□□ 0.47
COL27A1-203ENST00000468565 CAVIN4Q5BKX8 364 aa17.99■□□□□ 0.47
COL27A1-203ENST00000468565 ZBED3Q96IU2 234 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-203ENST00000468565 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
COL27A1-203ENST00000468565 IFIT1P09914 478 aaKnown RBP17.98■□□□□ 0.47
COL27A1-203ENST00000468565 ECE1P42892 770 aa17.98■□□□□ 0.47
COL27A1-203ENST00000468565 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
COL27A1-203ENST00000468565 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
COL27A1-203ENST00000468565 HSPA1AP0DMV8 641 aaKnown RBP17.98■□□□□ 0.47
COL27A1-203ENST00000468565 HSPA1BP0DMV9 641 aaKnown RBP17.98■□□□□ 0.47
COL27A1-203ENST00000468565 DLK2Q6UY11 383 aa17.98■□□□□ 0.47
COL27A1-203ENST00000468565 MTMR14Q8NCE2 650 aa17.98■□□□□ 0.47
COL27A1-203ENST00000468565 GNAI2P04899 355 aa17.97■□□□□ 0.47
COL27A1-203ENST00000468565 IL15P40933 162 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-203ENST00000468565 LPIN2Q92539 896 aa17.97■□□□□ 0.47
COL27A1-203ENST00000468565 CDCA5Q96FF9 252 aa17.97■□□□□ 0.47
COL27A1-203ENST00000468565 CAPNS2Q96L46 248 aa17.97■□□□□ 0.47
COL27A1-203ENST00000468565 SIL1Q9H173 461 aa17.97■□□□□ 0.47
COL27A1-203ENST00000468565 PAPPA2Q9BXP8 1791 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 SLC5A1P13866 664 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 GBA2Q9HCG7 927 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-203ENST00000468565 JAG2Q9Y219 1238 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 DLGAP5Q15398 846 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 MFSD14BQ5SR56 506 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 PAXIP1Q6ZW49 1069 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-203ENST00000468565 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
COL27A1-203ENST00000468565 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.47
COL27A1-203ENST00000468565 C2orf69Q8N8R5 385 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 CEP126Q9P2H0 1117 aa17.96■□□□□ 0.47
COL27A1-203ENST00000468565 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
COL27A1-203ENST00000468565 CYP4F22Q6NT55 531 aa17.95■□□□□ 0.46
COL27A1-203ENST00000468565 APOBEC3FQ8IUX4 373 aaKnown RBP17.95■□□□□ 0.46
COL27A1-203ENST00000468565 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
COL27A1-203ENST00000468565 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-203ENST00000468565 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-203ENST00000468565 BCAMP50895 628 aa17.94■□□□□ 0.46
COL27A1-203ENST00000468565 TBC1D22AQ8WUA7 517 aa17.94■□□□□ 0.46
COL27A1-203ENST00000468565 HUNKP57058 714 aa17.94■□□□□ 0.46
COL27A1-203ENST00000468565 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
COL27A1-203ENST00000468565 CFAP100Q494V2 611 aa17.94■□□□□ 0.46
COL27A1-203ENST00000468565 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-203ENST00000468565 FKBP1BP68106 108 aa17.93■□□□□ 0.46
COL27A1-203ENST00000468565 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-203ENST00000468565 SPDYE2BA6NHP3 402 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 SPDYE6P0CI01 402 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
COL27A1-203ENST00000468565 SERPINA10Q9UK55 444 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 TTF2Q9UNY4 1162 aaKnown RBP17.92■□□□□ 0.46
COL27A1-203ENST00000468565 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
COL27A1-203ENST00000468565 MYO1BO43795 1136 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 RLBP1P12271 317 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 MAP2K2P36507 400 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 MAP2K1Q02750 393 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-203ENST00000468565 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
COL27A1-203ENST00000468565 CHAF1AQ13111 956 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-203ENST00000468565 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
COL27A1-203ENST00000468565 SUGT1Q9Y2Z0 365 aa17.91■□□□□ 0.46
COL27A1-203ENST00000468565 GRM1Q13255 1194 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-203ENST00000468565 SCAF8Q9UPN6 1271 aaKnown RBP17.9■□□□□ 0.46
COL27A1-203ENST00000468565 PCDHAC2Q9Y5I4 1007 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 PNMA6EA0A0J9YXQ4 647 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 ZBTB7BO15156 539 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-203ENST00000468565 MS4A1P11836 297 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms