RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SSH1Q8WYL5 1049 aa30.94■■■□□ 2.54
PTCH1-210ENST00000468211 E9PSI1 815 aa30.93■■■□□ 2.54
PTCH1-210ENST00000468211 TRPA1O75762 1119 aa30.93■■■□□ 2.54
PTCH1-210ENST00000468211 SLFN5Q08AF3 891 aa30.93■■■□□ 2.54
PTCH1-210ENST00000468211 MCOLN1Q9GZU1 580 aa30.93■■■□□ 2.54
PTCH1-210ENST00000468211 SAGE1Q9NXZ1 904 aa30.93■■■□□ 2.54
PTCH1-210ENST00000468211 F8W031 263 aaPredicted RBP30.92■■■□□ 2.54
PTCH1-210ENST00000468211 BICC1Q9H694 974 aaKnown RBP30.92■■■□□ 2.54
PTCH1-210ENST00000468211 TTLL12Q14166 644 aaPredicted RBP30.91■■■□□ 2.54
PTCH1-210ENST00000468211 APOBEC3FQ8IUX4 373 aaKnown RBP30.91■■■□□ 2.54
PTCH1-210ENST00000468211 ANKRD44Q8N8A2 993 aa30.91■■■□□ 2.54
PTCH1-210ENST00000468211 CDCA7LQ96GN5 454 aa30.91■■■□□ 2.54
PTCH1-210ENST00000468211 DLGAP5Q15398 846 aa30.9■■■□□ 2.54
PTCH1-210ENST00000468211 RIPOR2Q9Y4F9 1068 aa30.9■■■□□ 2.54
PTCH1-210ENST00000468211 AOX1Q06278 1338 aa30.9■■■□□ 2.54
PTCH1-210ENST00000468211 GYG1P46976 350 aa30.89■■■□□ 2.54
PTCH1-210ENST00000468211 PRKG1Q13976 671 aa30.89■■■□□ 2.54
PTCH1-210ENST00000468211 RABL6Q3YEC7 729 aaPredicted RBP30.89■■■□□ 2.54
PTCH1-210ENST00000468211 MTMR14Q8NCE2 650 aa30.89■■■□□ 2.54
PTCH1-210ENST00000468211 CCDC85CA6NKD9 419 aa30.88■■■□□ 2.53
PTCH1-210ENST00000468211 FKBP1AP62942 108 aaKnown RBP30.88■■■□□ 2.53
PTCH1-210ENST00000468211 DGKZQ13574 1117 aa30.88■■■□□ 2.53
PTCH1-210ENST00000468211 UBE4AQ14139 1066 aa30.88■■■□□ 2.53
PTCH1-210ENST00000468211 FZD1Q9UP38 647 aa30.88■■■□□ 2.53
PTCH1-210ENST00000468211 PTPRCP08575 1304 aa30.88■■■□□ 2.53
PTCH1-210ENST00000468211 NF2P35240 595 aa30.87■■■□□ 2.53
PTCH1-210ENST00000468211 CFAP100Q494V2 611 aa30.87■■■□□ 2.53
PTCH1-210ENST00000468211 TDRD7Q8NHU6 1098 aaKnown RBP30.87■■■□□ 2.53
PTCH1-210ENST00000468211 FAM84BQ96KN1 310 aaPredicted RBP30.87■■■□□ 2.53
PTCH1-210ENST00000468211 PRMT6Q96LA8 375 aaPredicted RBP30.87■■■□□ 2.53
PTCH1-210ENST00000468211 ARAP2Q8WZ64 1704 aa30.87■■■□□ 2.53
PTCH1-210ENST00000468211 PTPN12Q05209 780 aaKnown RBP30.86■■■□□ 2.53
PTCH1-210ENST00000468211 LRRC24Q50LG9 513 aa30.86■■■□□ 2.53
PTCH1-210ENST00000468211 DEFB129Q9H1M3 183 aa30.86■■■□□ 2.53
PTCH1-210ENST00000468211 FAM205AQ6ZU69 1335 aa30.86■■■□□ 2.53
PTCH1-210ENST00000468211 SSC5DA1L4H1 1573 aa30.85■■■□□ 2.53
PTCH1-210ENST00000468211 SPDYE2BA6NHP3 402 aa30.85■■■□□ 2.53
PTCH1-210ENST00000468211 SPDYE6P0CI01 402 aa30.85■■■□□ 2.53
PTCH1-210ENST00000468211 USP44Q9H0E7 712 aa30.85■■■□□ 2.53
PTCH1-210ENST00000468211 COL1A1P02452 1464 aaPredicted RBP30.84■■■□□ 2.53
PTCH1-210ENST00000468211 CLRN2A0PK11 232 aa30.84■■■□□ 2.53
PTCH1-210ENST00000468211 HIBADHP31937 336 aaKnown RBP30.84■■■□□ 2.53
PTCH1-210ENST00000468211 MKRN3Q13064 507 aaKnown RBP30.84■■■□□ 2.53
PTCH1-210ENST00000468211 REM2Q8IYK8 340 aaPredicted RBP30.83■■■□□ 2.53
PTCH1-210ENST00000468211 KLHDC4Q8TBB5 520 aa30.83■■■□□ 2.53
PTCH1-210ENST00000468211 MROH5Q6ZUA9 1318 aa30.82■■■□□ 2.52
PTCH1-210ENST00000468211 LDLRAD1Q5T700 205 aa30.82■■■□□ 2.52
PTCH1-210ENST00000468211 ANGEL1Q9UNK9 670 aaKnown RBP30.82■■■□□ 2.52
PTCH1-210ENST00000468211 MFSD14BQ5SR56 506 aa30.81■■■□□ 2.52
PTCH1-210ENST00000468211 ARMC9Q7Z3E5 817 aa30.81■■■□□ 2.52
PTCH1-210ENST00000468211 TRMT2AQ8IZ69 625 aaKnown RBP30.81■■■□□ 2.52
PTCH1-210ENST00000468211 VGLL2Q8N8G2 317 aa30.8■■■□□ 2.52
PTCH1-210ENST00000468211 RBM5P52756 815 aaKnown RBP eCLIP30.79■■■□□ 2.52
PTCH1-210ENST00000468211 ALDH1L2Q3SY69 923 aa30.79■■■□□ 2.52
PTCH1-210ENST00000468211 FBXO33Q7Z6M2 555 aa30.79■■■□□ 2.52
PTCH1-210ENST00000468211 VEZTQ9HBM0 779 aa30.79■■■□□ 2.52
PTCH1-210ENST00000468211 IQSEC3Q9UPP2 1182 aaPredicted RBP30.79■■■□□ 2.52
PTCH1-210ENST00000468211 GRIK5Q16478 980 aa30.78■■■□□ 2.52
PTCH1-210ENST00000468211 METTL24Q5JXM2 366 aa30.78■■■□□ 2.52
PTCH1-210ENST00000468211 TTF2Q9UNY4 1162 aaKnown RBP30.78■■■□□ 2.52
PTCH1-210ENST00000468211 MYO1BO43795 1136 aa30.77■■■□□ 2.52
PTCH1-210ENST00000468211 TM4SF4P48230 202 aa30.77■■■□□ 2.52
PTCH1-210ENST00000468211 SMC4Q9NTJ3 1288 aa30.77■■■□□ 2.52
PTCH1-210ENST00000468211 PPP2R3BQ9Y5P8 575 aa30.77■■■□□ 2.52
PTCH1-210ENST00000468211 PDE8BO95263 885 aa30.76■■■□□ 2.51
PTCH1-210ENST00000468211 TBC1D8O95759 1140 aa30.76■■■□□ 2.51
PTCH1-210ENST00000468211 NBPF12Q5TAG4 269 aaPredicted RBP30.76■■■□□ 2.51
PTCH1-210ENST00000468211 MAP3K11Q16584 847 aa30.75■■■□□ 2.51
PTCH1-210ENST00000468211 SPRYD7Q5W111 196 aa30.75■■■□□ 2.51
PTCH1-210ENST00000468211 CLMNQ96JQ2 1002 aa30.75■■■□□ 2.51
PTCH1-210ENST00000468211 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.75■■■□□ 2.51
PTCH1-210ENST00000468211 RFX5P48382 616 aaPredicted RBP30.74■■■□□ 2.51
PTCH1-210ENST00000468211 LAMB1P07942 1786 aa30.74■■■□□ 2.51
PTCH1-210ENST00000468211 OTOFQ9HC10 1997 aa30.74■■■□□ 2.51
PTCH1-210ENST00000468211 RASA3Q14644 834 aa30.73■■■□□ 2.51
PTCH1-210ENST00000468211 SPDYE2Q495Y8 402 aa30.73■■■□□ 2.51
PTCH1-210ENST00000468211 TDRD3Q9H7E2 651 aaKnown RBP30.73■■■□□ 2.51
PTCH1-210ENST00000468211 ZNF70Q9UC06 446 aaPredicted RBP30.73■■■□□ 2.51
PTCH1-210ENST00000468211 SERPINA10Q9UK55 444 aa30.73■■■□□ 2.51
PTCH1-210ENST00000468211 RGS19P49795 217 aa30.72■■■□□ 2.51
PTCH1-210ENST00000468211 BCAMP50895 628 aa30.72■■■□□ 2.51
PTCH1-210ENST00000468211 CHAF1AQ13111 956 aaPredicted RBP30.72■■■□□ 2.51
PTCH1-210ENST00000468211 VPS37DQ86XT2 251 aa30.72■■■□□ 2.51
PTCH1-210ENST00000468211 MYH13Q9UKX3 1938 aa30.71■■■□□ 2.51
PTCH1-210ENST00000468211 DZIP1LQ8IYY4 767 aaKnown RBP30.71■■■□□ 2.51
PTCH1-210ENST00000468211 PPP1R12BO60237 982 aaPredicted RBP30.7■■■□□ 2.51
PTCH1-210ENST00000468211 FGFR2P21802 821 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 CRKP46108 304 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 SUPT20HL1Q3ZLR7 823 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 CDAN1Q8IWY9 1227 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 ZNF296Q8WUU4 475 aaPredicted RBP30.7■■■□□ 2.51
PTCH1-210ENST00000468211 SLC10A4Q96EP9 437 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 R3HDMLQ9H3Y0 253 aa30.7■■■□□ 2.51
PTCH1-210ENST00000468211 NOB1Q9ULX3 412 aaKnown RBP30.7■■■□□ 2.51
PTCH1-210ENST00000468211 USP2O75604 605 aaPredicted RBP30.69■■■□□ 2.5
PTCH1-210ENST00000468211 SREBF2Q12772 1141 aa30.69■■■□□ 2.5
PTCH1-210ENST00000468211 CAVIN4Q5BKX8 364 aa30.69■■■□□ 2.5
PTCH1-210ENST00000468211 CTU1Q7Z7A3 348 aaKnown RBP30.69■■■□□ 2.5
PTCH1-210ENST00000468211 EYA2O00167 538 aa30.68■■■□□ 2.5
PTCH1-210ENST00000468211 ATG9AQ7Z3C6 839 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms