RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 TINF2Q9BSI4 451 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 NAGPAQ9UK23 515 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 SAMM50Q9Y512 469 aa6.9□□□□□ -1.3
CDC42BPA-211ENST00000466538 B3GALT4O96024 378 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 EPXP11678 715 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 CDC27P30260 824 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 CABP4P57796 275 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 RPS26P62854 115 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 RNFT1Q5M7Z0 435 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 SPATA32Q96LK8 384 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 GMLQ99445 158 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 COPRSQ9NQ92 184 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
CDC42BPA-211ENST00000466538 ENC1O14682 589 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 IGSF3O75054 1194 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 GBP2P32456 591 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 FAAP100Q0VG06 881 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 GPN3Q9UHW5 284 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 TRIM33Q9UPN9 1127 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 PCDHGB7Q9Y5F8 929 aa6.88□□□□□ -1.31
CDC42BPA-211ENST00000466538 ERBB4Q15303 1308 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 FBXO24O75426 580 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 ADAMTS2O95450 1211 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 SLURP2P0DP57 97 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 EIF4A3P38919 411 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 GJA8P48165 433 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 LIG3P49916 1009 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 IKBKEQ14164 716 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 AGMOQ6ZNB7 445 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 EDARADDQ8WWZ3 215 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 WNT8BQ93098 351 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 ACDQ96AP0 544 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 SPON2Q9BUD6 331 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 SOX17Q9H6I2 414 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 KCNQ5Q9NR82 932 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 STARD13Q9Y3M8 1113 aa6.87□□□□□ -1.31
CDC42BPA-211ENST00000466538 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 LILRB5O75023 590 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 NME2P22392 152 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 LMNB2Q03252 620 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 ARID5AQ03989 594 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 LRRC14Q15048 493 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 GALNT6Q8NCL4 622 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 TRIM56Q9BRZ2 755 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 EMILIN2Q9BXX0 1053 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
CDC42BPA-211ENST00000466538 H3BRJ5 948 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 OIP5O43482 229 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 CELA3AP09093 270 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 TNNI2P48788 182 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 ARL4DP49703 201 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 PAK2Q13177 524 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 GRIK5Q16478 980 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 IL22RA1Q8N6P7 574 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 ZNF296Q8WUU4 475 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 NUDT8Q8WV74 236 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 ARMC5Q96C12 935 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 RHOVQ96L33 236 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 NT5C1AQ9BXI3 368 aa6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 JPH1Q9HDC5 661 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 SH2B1Q9NRF2 756 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-211ENST00000466538 ROBO2Q9HCK4 1378 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 SOX1O00570 391 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 BCRP11274 1271 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 LMNB1P20700 586 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 BMP6P22004 513 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 ARNTP27540 789 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 AFF1P51825 1210 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 PIP4K2BP78356 416 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 KRT76Q01546 638 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 CAMK2GQ13555 558 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 PCNX4Q63HM2 1172 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 408.3 ms