RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 ZNF609O15014 1411 aa19.57■□□□□ 0.72
AGRN-204ENST00000466223 FAM205AQ6ZU69 1335 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 POTECB2RU33 542 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 SEMA3EO15041 775 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 EPHX2P34913 555 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 CHAF1AQ13111 956 aaPredicted RBP19.56■□□□□ 0.72
AGRN-204ENST00000466223 OGFOD1Q8N543 542 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 TBC1D22AQ8WUA7 517 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 LRRCC1Q9C099 1032 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 IL1RAPL2Q9NP60 686 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
AGRN-204ENST00000466223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.56■□□□□ 0.72
AGRN-204ENST00000466223 IFIT2P09913 472 aaKnown RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 UQCRFS1P1P0C7P4 283 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 EPS15P42566 896 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 PHKA1P46020 1223 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 MMP14P50281 582 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 AACSQ86V21 672 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 MICALL2Q8IY33 904 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 TAF1DQ9H5J8 278 aaPredicted RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 ADARB2Q9NS39 739 aaKnown RBP19.55■□□□□ 0.72
AGRN-204ENST00000466223 HDAC9Q9UKV0 1011 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 JAG2Q9Y219 1238 aa19.55■□□□□ 0.72
AGRN-204ENST00000466223 KIF3CO14782 793 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 NEFLP07196 543 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 EAPPQ56P03 285 aaPredicted RBP19.54■□□□□ 0.72
AGRN-204ENST00000466223 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 TTC39AQ5SRH9 613 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 USP50Q70EL3 339 aaPredicted RBP19.54■□□□□ 0.72
AGRN-204ENST00000466223 WDR66Q8TBY9 1149 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 EAF2Q96CJ1 260 aaPredicted RBP19.54■□□□□ 0.72
AGRN-204ENST00000466223 MYH13Q9UKX3 1938 aa19.54■□□□□ 0.72
AGRN-204ENST00000466223 GCC1Q96CN9 775 aa19.53■□□□□ 0.72
AGRN-204ENST00000466223 DBNDD2Q9BQY9 259 aa19.53■□□□□ 0.72
AGRN-204ENST00000466223 MXD3Q9BW11 206 aa19.53■□□□□ 0.72
AGRN-204ENST00000466223 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
AGRN-204ENST00000466223 TOMM70O94826 608 aa19.52■□□□□ 0.72
AGRN-204ENST00000466223 KIAA0825Q8IV33 1275 aa19.52■□□□□ 0.72
AGRN-204ENST00000466223 GMLQ99445 158 aa19.52■□□□□ 0.72
AGRN-204ENST00000466223 ZBTB22O15209 634 aa19.51■□□□□ 0.71
AGRN-204ENST00000466223 RBM26Q5T8P6 1007 aaKnown RBP19.51■□□□□ 0.71
AGRN-204ENST00000466223 ZGPATQ8N5A5 531 aaKnown RBP19.51■□□□□ 0.71
AGRN-204ENST00000466223 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
AGRN-204ENST00000466223 F8W031 263 aaPredicted RBP19.5■□□□□ 0.71
AGRN-204ENST00000466223 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 ARID4AP29374 1257 aaPredicted RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 ZNF280AP59817 542 aaPredicted RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 TBC1D10BQ4KMP7 808 aaPredicted RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 CERS5Q8N5B7 392 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 SPATA5Q8NB90 893 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 RBM46Q8TBY0 533 aaKnown RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 MYOZ2Q9NPC6 264 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 SUGT1Q9Y2Z0 365 aa19.49■□□□□ 0.71
AGRN-204ENST00000466223 PDS5AQ29RF7 1337 aaKnown RBP19.49■□□□□ 0.71
AGRN-204ENST00000466223 SHTN1A0MZ66 631 aa19.48■□□□□ 0.71
AGRN-204ENST00000466223 RASGRF1Q13972 1273 aa19.48■□□□□ 0.71
AGRN-204ENST00000466223 ANKRD45Q5TZF3 282 aa19.48■□□□□ 0.71
AGRN-204ENST00000466223 SPTY2D1Q68D10 685 aaPredicted RBP19.48■□□□□ 0.71
AGRN-204ENST00000466223 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
AGRN-204ENST00000466223 TLR7Q9NYK1 1049 aaKnown RBP19.48■□□□□ 0.71
AGRN-204ENST00000466223 ZNF646O15015 1829 aaPredicted RBP19.48■□□□□ 0.71
AGRN-204ENST00000466223 MAST3O60307 1309 aa19.48■□□□□ 0.71
AGRN-204ENST00000466223 RBM5P52756 815 aaKnown RBP eCLIP19.47■□□□□ 0.712e-14■■■□□ 14.9
AGRN-204ENST00000466223 KIF4BQ2VIQ3 1234 aa19.47■□□□□ 0.71
AGRN-204ENST00000466223 SMC1BQ8NDV3 1235 aa19.47■□□□□ 0.71
AGRN-204ENST00000466223 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
AGRN-204ENST00000466223 HMG20BQ9P0W2 317 aa19.47■□□□□ 0.71
AGRN-204ENST00000466223 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
AGRN-204ENST00000466223 LDHBP07195 334 aaKnown RBP19.46■□□□□ 0.71
AGRN-204ENST00000466223 DLGAP5Q15398 846 aa19.46■□□□□ 0.71
AGRN-204ENST00000466223 CHADLQ6NUI6 762 aa19.46■□□□□ 0.71
AGRN-204ENST00000466223 ZC3H15Q8WU90 426 aaKnown RBP19.46■□□□□ 0.71
AGRN-204ENST00000466223 CEP350Q5VT06 3117 aa19.46■□□□□ 0.71
AGRN-204ENST00000466223 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
AGRN-204ENST00000466223 IGHDP01880 384 aa19.45■□□□□ 0.7
AGRN-204ENST00000466223 MCAMP43121 646 aa19.45■□□□□ 0.7
AGRN-204ENST00000466223 TRPM4Q8TD43 1214 aa19.45■□□□□ 0.7
AGRN-204ENST00000466223 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
AGRN-204ENST00000466223 MYO1BO43795 1136 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 FSTL1Q12841 308 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
AGRN-204ENST00000466223 COL1A1P02452 1464 aaPredicted RBP19.43■□□□□ 0.7
AGRN-204ENST00000466223 HIRAP54198 1017 aaPredicted RBP19.43■□□□□ 0.7
AGRN-204ENST00000466223 HDLBPQ00341 1268 aaKnown RBP19.43■□□□□ 0.7
AGRN-204ENST00000466223 SCARF1Q14162 830 aa19.43■□□□□ 0.7
AGRN-204ENST00000466223 CFAP100Q494V2 611 aa19.43■□□□□ 0.7
AGRN-204ENST00000466223 B4GALNT3Q6L9W6 998 aa19.43■□□□□ 0.7
AGRN-204ENST00000466223 SLF2Q8IX21 1173 aa19.43■□□□□ 0.7
AGRN-204ENST00000466223 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms