RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FKBP1AP62942 108 aaKnown RBP23.7■■□□□ 1.38
COL5A1-203ENST00000460264 C2orf69Q8N8R5 385 aa23.7■■□□□ 1.38
COL5A1-203ENST00000460264 TDRD7Q8NHU6 1098 aaKnown RBP23.7■■□□□ 1.38
COL5A1-203ENST00000460264 ZBED3Q96IU2 234 aaPredicted RBP23.7■■□□□ 1.38
COL5A1-203ENST00000460264 FAM84BQ96KN1 310 aaPredicted RBP23.7■■□□□ 1.38
COL5A1-203ENST00000460264 SCAF8Q9UPN6 1271 aaKnown RBP23.7■■□□□ 1.38
COL5A1-203ENST00000460264 JAG2Q9Y219 1238 aa23.7■■□□□ 1.38
COL5A1-203ENST00000460264 FAM205AQ6ZU69 1335 aa23.69■■□□□ 1.38
COL5A1-203ENST00000460264 PDE8BO95263 885 aa23.69■■□□□ 1.38
COL5A1-203ENST00000460264 HIBADHP31937 336 aaKnown RBP23.69■■□□□ 1.38
COL5A1-203ENST00000460264 MAP2K2P36507 400 aa23.69■■□□□ 1.38
COL5A1-203ENST00000460264 CTCFP49711 727 aaPredicted RBP23.68■■□□□ 1.38
COL5A1-203ENST00000460264 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
COL5A1-203ENST00000460264 MEIS3Q99687 375 aa23.68■■□□□ 1.38
COL5A1-203ENST00000460264 MYH13Q9UKX3 1938 aa23.68■■□□□ 1.38
COL5A1-203ENST00000460264 PTPN12Q05209 780 aaKnown RBP23.67■■□□□ 1.38
COL5A1-203ENST00000460264 LRRFIP2Q9Y608 721 aaKnown RBP23.67■■□□□ 1.38
COL5A1-203ENST00000460264 F8W031 263 aaPredicted RBP23.66■■□□□ 1.38
COL5A1-203ENST00000460264 EYA2O00167 538 aa23.66■■□□□ 1.38
COL5A1-203ENST00000460264 BCAR3O75815 825 aa23.66■■□□□ 1.38
COL5A1-203ENST00000460264 TRIM27P14373 513 aa23.66■■□□□ 1.38
COL5A1-203ENST00000460264 MTMR14Q8NCE2 650 aa23.66■■□□□ 1.38
COL5A1-203ENST00000460264 HDAC5Q9UQL6 1122 aa23.66■■□□□ 1.38
COL5A1-203ENST00000460264 IPO8O15397 1037 aaKnown RBP23.65■■□□□ 1.38
COL5A1-203ENST00000460264 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
COL5A1-203ENST00000460264 DLGAP5Q15398 846 aa23.65■■□□□ 1.38
COL5A1-203ENST00000460264 RGMBQ6NW40 437 aa23.65■■□□□ 1.38
COL5A1-203ENST00000460264 FBXO33Q7Z6M2 555 aa23.65■■□□□ 1.38
COL5A1-203ENST00000460264 NOGQ13253 232 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 MFSD14BQ5SR56 506 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 PRAMEF18Q5VWM3 479 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 ATG9AQ7Z3C6 839 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 VPS37DQ86XT2 251 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 APOBEC3FQ8IUX4 373 aaKnown RBP23.64■■□□□ 1.37
COL5A1-203ENST00000460264 PRDM10Q9NQV6 1147 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 TNNQ9UQP3 1299 aa23.64■■□□□ 1.37
COL5A1-203ENST00000460264 COL1A1P02452 1464 aaPredicted RBP23.63■■□□□ 1.37
COL5A1-203ENST00000460264 FAM155AB1AL88 458 aaPredicted RBP23.63■■□□□ 1.37
COL5A1-203ENST00000460264 HSPA8P11142 646 aaKnown RBP23.63■■□□□ 1.37
COL5A1-203ENST00000460264 FGFR2P21802 821 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 FKBP1BP68106 108 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 CAVIN4Q5BKX8 364 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 ATF7IPQ6VMQ6 1270 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 TNS4Q8IZW8 715 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 FRAT1Q92837 279 aaPredicted RBP23.63■■□□□ 1.37
COL5A1-203ENST00000460264 BEGAINQ9BUH8 593 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
COL5A1-203ENST00000460264 PCDHAC2Q9Y5I4 1007 aa23.63■■□□□ 1.37
COL5A1-203ENST00000460264 ZBED9Q6R2W3 1325 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 SPDYE2BA6NHP3 402 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 GNAI3P08754 354 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 SPDYE6P0CI01 402 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 LBX1P52954 281 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 CFAP100Q494V2 611 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 SIL1Q9H173 461 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 FBXO3Q9UK99 471 aa23.62■■□□□ 1.37
COL5A1-203ENST00000460264 CIAO1O76071 339 aa23.61■■□□□ 1.37
COL5A1-203ENST00000460264 IFIT1P09914 478 aaKnown RBP23.61■■□□□ 1.37
COL5A1-203ENST00000460264 ZNF157P51786 506 aaPredicted RBP23.61■■□□□ 1.37
COL5A1-203ENST00000460264 CCDC102AQ96A19 550 aa23.61■■□□□ 1.37
COL5A1-203ENST00000460264 ZIC5Q96T25 663 aa23.61■■□□□ 1.37
COL5A1-203ENST00000460264 BCAMP50895 628 aa23.6■■□□□ 1.37
COL5A1-203ENST00000460264 AOX1Q06278 1338 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 SLC10A3P09131 477 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 SLC5A1P13866 664 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 NF2P35240 595 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
COL5A1-203ENST00000460264 MOB2Q70IA6 237 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
COL5A1-203ENST00000460264 PRMT6Q96LA8 375 aaPredicted RBP23.59■■□□□ 1.37
COL5A1-203ENST00000460264 TTF2Q9UNY4 1162 aaKnown RBP23.59■■□□□ 1.37
COL5A1-203ENST00000460264 MYO1BO43795 1136 aa23.58■■□□□ 1.37
COL5A1-203ENST00000460264 FRAT2O75474 233 aaPredicted RBP23.58■■□□□ 1.37
COL5A1-203ENST00000460264 LPIN2Q92539 896 aa23.58■■□□□ 1.37
COL5A1-203ENST00000460264 COPRSQ9NQ92 184 aa23.58■■□□□ 1.37
COL5A1-203ENST00000460264 SERPINA10Q9UK55 444 aa23.58■■□□□ 1.37
COL5A1-203ENST00000460264 PA2G4Q9UQ80 394 aaKnown RBP23.58■■□□□ 1.37
COL5A1-203ENST00000460264 AKAP11Q9UKA4 1901 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 CLRN2A0PK11 232 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 RBM5P52756 815 aaKnown RBP eCLIP23.57■■□□□ 1.36
COL5A1-203ENST00000460264 GRIK5Q16478 980 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 ZKSCAN2Q63HK3 967 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 RASAL3Q86YV0 1011 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 TBC1D22AQ8WUA7 517 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 DEFB129Q9H1M3 183 aa23.57■■□□□ 1.36
COL5A1-203ENST00000460264 CA12O43570 354 aa23.56■■□□□ 1.36
COL5A1-203ENST00000460264 IL15P40933 162 aaPredicted RBP23.56■■□□□ 1.36
COL5A1-203ENST00000460264 MTX1Q13505 466 aa23.56■■□□□ 1.36
COL5A1-203ENST00000460264 ATP2B3Q16720 1220 aa23.56■■□□□ 1.36
COL5A1-203ENST00000460264 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
COL5A1-203ENST00000460264 SSC5DA1L4H1 1573 aa23.56■■□□□ 1.36
COL5A1-203ENST00000460264 UBE2Q2LH0YL09 131 aa23.55■■□□□ 1.36
COL5A1-203ENST00000460264 TTLL12Q14166 644 aaPredicted RBP23.55■■□□□ 1.36
COL5A1-203ENST00000460264 TSKSQ9UJT2 592 aa23.55■■□□□ 1.36
COL5A1-203ENST00000460264 PPP2R3BQ9Y5P8 575 aa23.55■■□□□ 1.36
COL5A1-203ENST00000460264 SRGAP3O43295 1099 aa23.54■■□□□ 1.36
COL5A1-203ENST00000460264 CRKP46108 304 aa23.54■■□□□ 1.36
COL5A1-203ENST00000460264 KIF23Q02241 960 aaPredicted RBP23.54■■□□□ 1.36
COL5A1-203ENST00000460264 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
COL5A1-203ENST00000460264 VEZTQ9HBM0 779 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms