RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 KLHDC4Q8TBB5 520 aa26.21■■□□□ 1.79
SRM-202ENST00000459997 API5Q9BZZ5 524 aaKnown RBP26.21■■□□□ 1.79
SRM-202ENST00000459997 RARSP54136 660 aaKnown RBP26.2■■□□□ 1.78
SRM-202ENST00000459997 PAPPA2Q9BXP8 1791 aa26.2■■□□□ 1.78
SRM-202ENST00000459997 F8W031 263 aaPredicted RBP26.19■■□□□ 1.78
SRM-202ENST00000459997 HIBADHP31937 336 aaKnown RBP26.19■■□□□ 1.78
SRM-202ENST00000459997 ZNF157P51786 506 aaPredicted RBP26.19■■□□□ 1.78
SRM-202ENST00000459997 FKBP1AP62942 108 aaKnown RBP26.19■■□□□ 1.78
SRM-202ENST00000459997 PRAMEF18Q5VWM3 479 aa26.19■■□□□ 1.78
SRM-202ENST00000459997 ZBED3Q96IU2 234 aaPredicted RBP26.19■■□□□ 1.78
SRM-202ENST00000459997 DLGAP5Q15398 846 aa26.18■■□□□ 1.78
SRM-202ENST00000459997 TDRD7Q8NHU6 1098 aaKnown RBP26.18■■□□□ 1.78
SRM-202ENST00000459997 CCDC102AQ96A19 550 aa26.18■■□□□ 1.78
SRM-202ENST00000459997 FAM84BQ96KN1 310 aaPredicted RBP26.18■■□□□ 1.78
SRM-202ENST00000459997 FAM155AB1AL88 458 aaPredicted RBP26.17■■□□□ 1.78
SRM-202ENST00000459997 UBTFL1P0CB47 393 aaPredicted RBP26.17■■□□□ 1.78
SRM-202ENST00000459997 FKBP1BP68106 108 aa26.17■■□□□ 1.78
SRM-202ENST00000459997 APOBEC3FQ8IUX4 373 aaKnown RBP26.17■■□□□ 1.78
SRM-202ENST00000459997 ZIC5Q96T25 663 aa26.17■■□□□ 1.78
SRM-202ENST00000459997 FAM205AQ6ZU69 1335 aa26.16■■□□□ 1.78
SRM-202ENST00000459997 KIF16BQ96L93 1317 aa26.16■■□□□ 1.78
SRM-202ENST00000459997 PDE8BO95263 885 aa26.16■■□□□ 1.78
SRM-202ENST00000459997 VGLL2Q8N8G2 317 aa26.16■■□□□ 1.78
SRM-202ENST00000459997 TSKSQ9UJT2 592 aa26.16■■□□□ 1.78
SRM-202ENST00000459997 CAPN15O75808 1086 aa26.15■■□□□ 1.78
SRM-202ENST00000459997 VPS37DQ86XT2 251 aa26.15■■□□□ 1.78
SRM-202ENST00000459997 MTMR14Q8NCE2 650 aa26.15■■□□□ 1.78
SRM-202ENST00000459997 ECM29Q5VYK3 1845 aa26.15■■□□□ 1.78
SRM-202ENST00000459997 ARAP2Q8WZ64 1704 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 CA12O43570 354 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 RFX5P48382 616 aaPredicted RBP26.14■■□□□ 1.78
SRM-202ENST00000459997 CFAP100Q494V2 611 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 MFSD14BQ5SR56 506 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 MOB2Q70IA6 237 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 PCDHAC2Q9Y5I4 1007 aa26.14■■□□□ 1.78
SRM-202ENST00000459997 SLC10A3P09131 477 aa26.13■■□□□ 1.77
SRM-202ENST00000459997 NF2P35240 595 aa26.13■■□□□ 1.77
SRM-202ENST00000459997 CAVIN4Q5BKX8 364 aa26.13■■□□□ 1.77
SRM-202ENST00000459997 FBXO33Q7Z6M2 555 aa26.13■■□□□ 1.77
SRM-202ENST00000459997 ARHGAP45Q92619 1136 aa26.13■■□□□ 1.77
SRM-202ENST00000459997 EYA2O00167 538 aa26.12■■□□□ 1.77
SRM-202ENST00000459997 PTPN12Q05209 780 aaKnown RBP26.12■■□□□ 1.77
SRM-202ENST00000459997 TTLL12Q14166 644 aaPredicted RBP26.12■■□□□ 1.77
SRM-202ENST00000459997 IQSEC3Q9UPP2 1182 aaPredicted RBP26.12■■□□□ 1.77
SRM-202ENST00000459997 SPDYE2BA6NHP3 402 aa26.11■■□□□ 1.77
SRM-202ENST00000459997 MYO1BO43795 1136 aa26.11■■□□□ 1.77
SRM-202ENST00000459997 SPDYE6P0CI01 402 aa26.11■■□□□ 1.77
SRM-202ENST00000459997 RBM5P52756 815 aaKnown RBP eCLIP26.11■■□□□ 1.77
SRM-202ENST00000459997 HNRNPUQ00839 825 aaKnown RBP eCLIP26.11■■□□□ 1.77
SRM-202ENST00000459997 KIF23Q02241 960 aaPredicted RBP26.11■■□□□ 1.77
SRM-202ENST00000459997 PUM3Q15397 648 aaKnown RBP26.11■■□□□ 1.77
SRM-202ENST00000459997 HDAC5Q9UQL6 1122 aa26.11■■□□□ 1.77
SRM-202ENST00000459997 LRRFIP2Q9Y608 721 aaKnown RBP26.11■■□□□ 1.77
SRM-202ENST00000459997 COL1A1P02452 1464 aaPredicted RBP26.11■■□□□ 1.77
SRM-202ENST00000459997 UBE2Q2LH0YL09 131 aa26.1■■□□□ 1.77
SRM-202ENST00000459997 FRAT2O75474 233 aaPredicted RBP26.1■■□□□ 1.77
SRM-202ENST00000459997 RASAL3Q86YV0 1011 aa26.1■■□□□ 1.77
SRM-202ENST00000459997 PRMT6Q96LA8 375 aaPredicted RBP26.1■■□□□ 1.77
SRM-202ENST00000459997 MEIS3Q99687 375 aa26.1■■□□□ 1.77
SRM-202ENST00000459997 TTF2Q9UNY4 1162 aaKnown RBP26.1■■□□□ 1.77
SRM-202ENST00000459997 CLRN2A0PK11 232 aa26.09■■□□□ 1.77
SRM-202ENST00000459997 IFIT1P09914 478 aaKnown RBP26.09■■□□□ 1.77
SRM-202ENST00000459997 CHAF1AQ13111 956 aaPredicted RBP26.09■■□□□ 1.77
SRM-202ENST00000459997 INTS3Q68E01 1043 aaKnown RBP26.09■■□□□ 1.77
SRM-202ENST00000459997 SIL1Q9H173 461 aa26.09■■□□□ 1.77
SRM-202ENST00000459997 DEFB129Q9H1M3 183 aa26.09■■□□□ 1.77
SRM-202ENST00000459997 FGFR2P21802 821 aa26.08■■□□□ 1.77
SRM-202ENST00000459997 BCAMP50895 628 aa26.08■■□□□ 1.77
SRM-202ENST00000459997 ATG9AQ7Z3C6 839 aa26.08■■□□□ 1.77
SRM-202ENST00000459997 IPO8O15397 1037 aaKnown RBP26.07■■□□□ 1.76
SRM-202ENST00000459997 BCAR3O75815 825 aa26.07■■□□□ 1.76
SRM-202ENST00000459997 PRKG1Q13976 671 aa26.07■■□□□ 1.76
SRM-202ENST00000459997 FRAT1Q92837 279 aaPredicted RBP26.07■■□□□ 1.76
SRM-202ENST00000459997 VEZTQ9HBM0 779 aa26.07■■□□□ 1.76
SRM-202ENST00000459997 SERPINA10Q9UK55 444 aa26.07■■□□□ 1.76
SRM-202ENST00000459997 AOX1Q06278 1338 aa26.07■■□□□ 1.76
SRM-202ENST00000459997 SLC5A1P13866 664 aa26.06■■□□□ 1.76
SRM-202ENST00000459997 CIAO1O76071 339 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 TRIM27P14373 513 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 ARMC9Q7Z3E5 817 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 TBC1D22AQ8WUA7 517 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 LPIN2Q92539 896 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 FBXO3Q9UK99 471 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 PPP2R3BQ9Y5P8 575 aa26.05■■□□□ 1.76
SRM-202ENST00000459997 GNAI3P08754 354 aa26.04■■□□□ 1.76
SRM-202ENST00000459997 GRIK5Q16478 980 aa26.04■■□□□ 1.76
SRM-202ENST00000459997 ATF7IPQ6VMQ6 1270 aa26.04■■□□□ 1.76
SRM-202ENST00000459997 CSRNP1Q96S65 589 aa26.04■■□□□ 1.76
SRM-202ENST00000459997 SAGE1Q9NXZ1 904 aa26.03■■□□□ 1.76
SRM-202ENST00000459997 ANGEL1Q9UNK9 670 aaKnown RBP26.03■■□□□ 1.76
SRM-202ENST00000459997 PA2G4Q9UQ80 394 aaKnown RBP26.03■■□□□ 1.76
SRM-202ENST00000459997 TNNQ9UQP3 1299 aa26.03■■□□□ 1.76
SRM-202ENST00000459997 AKAP11Q9UKA4 1901 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 MYH13Q9UKX3 1938 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 CRKP46108 304 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 REM2Q8IYK8 340 aaPredicted RBP26.02■■□□□ 1.76
SRM-202ENST00000459997 CEP126Q9P2H0 1117 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 FZD1Q9UP38 647 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 SSC5DA1L4H1 1573 aa26.02■■□□□ 1.76
SRM-202ENST00000459997 ATP2B3Q16720 1220 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms