RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
HDLBP-228ENST00000459788 ZNF408Q9H9D4 720 aa12.55□□□□□ -0.4
HDLBP-228ENST00000459788 PPP2R3BQ9Y5P8 575 aa12.55□□□□□ -0.4
HDLBP-228ENST00000459788 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
HDLBP-228ENST00000459788 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
HDLBP-228ENST00000459788 PDE8BO95263 885 aa12.54□□□□□ -0.4
HDLBP-228ENST00000459788 HSPA8P11142 646 aaKnown RBP12.54□□□□□ -0.4
HDLBP-228ENST00000459788 HIBADHP31937 336 aaKnown RBP12.54□□□□□ -0.4
HDLBP-228ENST00000459788 NF2P35240 595 aa12.54□□□□□ -0.4
HDLBP-228ENST00000459788 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
HDLBP-228ENST00000459788 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
HDLBP-228ENST00000459788 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
HDLBP-228ENST00000459788 MYO1BO43795 1136 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-228ENST00000459788 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 FAM84BQ96KN1 310 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-228ENST00000459788 SAGE1Q9NXZ1 904 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
HDLBP-228ENST00000459788 SUGT1Q9Y2Z0 365 aa12.53□□□□□ -0.4
HDLBP-228ENST00000459788 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-228ENST00000459788 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-228ENST00000459788 EYA2O00167 538 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 CIAO1O76071 339 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 SLC10A3P09131 477 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-228ENST00000459788 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.41
HDLBP-228ENST00000459788 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
HDLBP-228ENST00000459788 CERS5Q8N5B7 392 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 MRIQ9BWK5 157 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
HDLBP-228ENST00000459788 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.41
HDLBP-228ENST00000459788 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 SNAP23O00161 211 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 PLIN1O60240 522 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 AOC2O75106 756 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
HDLBP-228ENST00000459788 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-228ENST00000459788 LBX1P52954 281 aa12.51□□□□□ -0.41
HDLBP-228ENST00000459788 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
HDLBP-228ENST00000459788 GNAI3P08754 354 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 FGFR2P21802 821 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
HDLBP-228ENST00000459788 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 LRRC24Q50LG9 513 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 MFSD14BQ5SR56 506 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
HDLBP-228ENST00000459788 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 VPS37DQ86XT2 251 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 LPIN2Q92539 896 aa12.5□□□□□ -0.41
HDLBP-228ENST00000459788 MAST3O60307 1309 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 GYG1P46976 350 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 GRM1Q13255 1194 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 MTX1Q13505 466 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 SUPT20HL1Q3ZLR7 823 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 CFAP100Q494V2 611 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
HDLBP-228ENST00000459788 SLC5A1P13866 664 aa12.48□□□□□ -0.41
HDLBP-228ENST00000459788 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-228ENST00000459788 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
HDLBP-228ENST00000459788 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
HDLBP-228ENST00000459788 DEFB129Q9H1M3 183 aa12.48□□□□□ -0.41
HDLBP-228ENST00000459788 SEMA3EO15041 775 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 PPP1R12BO60237 982 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-228ENST00000459788 KIF23Q02241 960 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-228ENST00000459788 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 LDLRAD1Q5T700 205 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 PRMT6Q96LA8 375 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-228ENST00000459788 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
HDLBP-228ENST00000459788 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
HDLBP-228ENST00000459788 FRAT2O75474 233 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-228ENST00000459788 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
HDLBP-228ENST00000459788 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
HDLBP-228ENST00000459788 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
HDLBP-228ENST00000459788 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
HDLBP-228ENST00000459788 MYH2Q9UKX2 1941 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 PDS5AQ29RF7 1337 aaKnown RBP12.45□□□□□ -0.42
HDLBP-228ENST00000459788 ZBED9Q6R2W3 1325 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 TRIM27P14373 513 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 TM4SF4P48230 202 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 TNNI2P48788 182 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 INHBEP58166 350 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-228ENST00000459788 HHIPL2Q6UWX4 724 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 DZIP1LQ8IYY4 767 aaKnown RBP12.45□□□□□ -0.42
HDLBP-228ENST00000459788 MIER1Q8N108 512 aa12.45□□□□□ -0.42
HDLBP-228ENST00000459788 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms