RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ECM29Q5VYK3 1845 aa27.28■■□□□ 1.96
CPNE1-220ENST00000458038 MYO1BO43795 1136 aa27.28■■□□□ 1.96
CPNE1-220ENST00000458038 LDLRAD1Q5T700 205 aa27.28■■□□□ 1.96
CPNE1-220ENST00000458038 DEFB129Q9H1M3 183 aa27.28■■□□□ 1.96
CPNE1-220ENST00000458038 C9orf78Q9NZ63 289 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-220ENST00000458038 A0A1B0GUL6 1792 aa27.27■■□□□ 1.96
CPNE1-220ENST00000458038 PTPN12Q05209 780 aaKnown RBP27.27■■□□□ 1.96
CPNE1-220ENST00000458038 UNCXA6NJT0 531 aa27.26■■□□□ 1.95
CPNE1-220ENST00000458038 SNAP23O00161 211 aa27.26■■□□□ 1.95
CPNE1-220ENST00000458038 CERS5Q8N5B7 392 aa27.26■■□□□ 1.95
CPNE1-220ENST00000458038 CNNM1Q9NRU3 951 aa27.26■■□□□ 1.95
CPNE1-220ENST00000458038 TNRC18O15417 2968 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-220ENST00000458038 CFHR5Q9BXR6 569 aa27.25■■□□□ 1.95
CPNE1-220ENST00000458038 PPP1R12BO60237 982 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-220ENST00000458038 INHBEP58166 350 aa27.24■■□□□ 1.95
CPNE1-220ENST00000458038 MAP3K11Q16584 847 aa27.24■■□□□ 1.95
CPNE1-220ENST00000458038 SUPT20HL1Q3ZLR7 823 aa27.24■■□□□ 1.95
CPNE1-220ENST00000458038 SRCIN1Q9C0H9 1055 aa27.24■■□□□ 1.95
CPNE1-220ENST00000458038 SPINK5Q9NQ38 1064 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-220ENST00000458038 ANGEL1Q9UNK9 670 aaKnown RBP27.24■■□□□ 1.95
CPNE1-220ENST00000458038 ZNF316A6NFI3 1004 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-220ENST00000458038 TBC1D8O95759 1140 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 ALDH1A1P00352 501 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 UBE4AQ14139 1066 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 EPHA10Q5JZY3 1008 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 SPRYD7Q5W111 196 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 ZNF296Q8WUU4 475 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-220ENST00000458038 SLC10A4Q96EP9 437 aa27.23■■□□□ 1.95
CPNE1-220ENST00000458038 SPDYE2BA6NHP3 402 aa27.22■■□□□ 1.95
CPNE1-220ENST00000458038 SPDYE6P0CI01 402 aa27.22■■□□□ 1.95
CPNE1-220ENST00000458038 PRKG1Q13976 671 aa27.22■■□□□ 1.95
CPNE1-220ENST00000458038 CFAP100Q494V2 611 aa27.22■■□□□ 1.95
CPNE1-220ENST00000458038 GPR25O00155 361 aa27.21■■□□□ 1.95
CPNE1-220ENST00000458038 PLIN1O60240 522 aa27.21■■□□□ 1.95
CPNE1-220ENST00000458038 ZNF594Q96JF6 807 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-220ENST00000458038 FAM205AQ6ZU69 1335 aa27.2■■□□□ 1.95
CPNE1-220ENST00000458038 MANSC4A6NHS7 340 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-220ENST00000458038 SLC4A10Q6U841 1118 aa27.2■■□□□ 1.94
CPNE1-220ENST00000458038 F8W031 263 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-220ENST00000458038 ZBTB48P10074 688 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-220ENST00000458038 MKRN3Q13064 507 aaKnown RBP27.19■■□□□ 1.94
CPNE1-220ENST00000458038 PRMT6Q96LA8 375 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-220ENST00000458038 FAM9BQ8IZU0 186 aa27.18■■□□□ 1.94
CPNE1-220ENST00000458038 TDRD7Q8NHU6 1098 aaKnown RBP27.18■■□□□ 1.94
CPNE1-220ENST00000458038 FKTNO75072 461 aa27.17■■□□□ 1.94
CPNE1-220ENST00000458038 HIBADHP31937 336 aaKnown RBP27.17■■□□□ 1.94
CPNE1-220ENST00000458038 RBM5P52756 815 aaKnown RBP eCLIP27.17■■□□□ 1.94
CPNE1-220ENST00000458038 TNFAIP1Q13829 316 aa27.17■■□□□ 1.94
CPNE1-220ENST00000458038 SERPINA10Q9UK55 444 aa27.17■■□□□ 1.94
CPNE1-220ENST00000458038 HPS5Q9UPZ3 1129 aa27.17■■□□□ 1.94
CPNE1-220ENST00000458038 UTYO14607 1347 aa27.16■■□□□ 1.94
CPNE1-220ENST00000458038 IREB2P48200 963 aaKnown RBP27.16■■□□□ 1.94
CPNE1-220ENST00000458038 MROH5Q6ZUA9 1318 aa27.16■■□□□ 1.94
CPNE1-220ENST00000458038 CLRN2A0PK11 232 aa27.15■■□□□ 1.94
CPNE1-220ENST00000458038 SOX10P56693 466 aa27.15■■□□□ 1.94
CPNE1-220ENST00000458038 MFSD14BQ5SR56 506 aa27.15■■□□□ 1.94
CPNE1-220ENST00000458038 VEZTQ9HBM0 779 aa27.15■■□□□ 1.94
CPNE1-220ENST00000458038 FBXO46Q6PJ61 603 aaPredicted RBP27.14■■□□□ 1.94
CPNE1-220ENST00000458038 SUCLG2Q96I99 432 aa27.14■■□□□ 1.94
CPNE1-220ENST00000458038 FAM84BQ96KN1 310 aaPredicted RBP27.14■■□□□ 1.94
CPNE1-220ENST00000458038 RIPOR2Q9Y4F9 1068 aa27.14■■□□□ 1.94
CPNE1-220ENST00000458038 PCDHAC2Q9Y5I4 1007 aa27.14■■□□□ 1.94
CPNE1-220ENST00000458038 LAMB1P07942 1786 aa27.14■■□□□ 1.93
CPNE1-220ENST00000458038 SLC34A2O95436 690 aa27.13■■□□□ 1.93
CPNE1-220ENST00000458038 RASA3Q14644 834 aa27.13■■□□□ 1.93
CPNE1-220ENST00000458038 IFNL1Q8IU54 200 aa27.13■■□□□ 1.93
CPNE1-220ENST00000458038 KAZALD1Q96I82 304 aa27.13■■□□□ 1.93
CPNE1-220ENST00000458038 WNK4Q96J92 1243 aa27.13■■□□□ 1.93
CPNE1-220ENST00000458038 NBPF7P0C2Y1 421 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-220ENST00000458038 NBPF12Q5TAG4 269 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-220ENST00000458038 OTUD7BQ6GQQ9 843 aa27.12■■□□□ 1.93
CPNE1-220ENST00000458038 ANKRD13AQ8IZ07 590 aa27.12■■□□□ 1.93
CPNE1-220ENST00000458038 TTF2Q9UNY4 1162 aaKnown RBP27.12■■□□□ 1.93
CPNE1-220ENST00000458038 JAG2Q9Y219 1238 aa27.12■■□□□ 1.93
CPNE1-220ENST00000458038 SSC5DA1L4H1 1573 aa27.12■■□□□ 1.93
CPNE1-220ENST00000458038 GYG1P46976 350 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 RABL6Q3YEC7 729 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-220ENST00000458038 SPDYE2Q495Y8 402 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 VPS37DQ86XT2 251 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 CLMNQ96JQ2 1002 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 PUS3Q9BZE2 481 aaKnown RBP27.11■■□□□ 1.93
CPNE1-220ENST00000458038 FZD1Q9UP38 647 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 PTPRCP08575 1304 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 ZNF521Q96K83 1311 aa27.11■■□□□ 1.93
CPNE1-220ENST00000458038 USP2O75604 605 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-220ENST00000458038 ZNF70Q9UC06 446 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-220ENST00000458038 CAVIN4Q5BKX8 364 aa27.09■■□□□ 1.93
CPNE1-220ENST00000458038 FBXO33Q7Z6M2 555 aa27.09■■□□□ 1.93
CPNE1-220ENST00000458038 TBC1D22AQ8WUA7 517 aa27.09■■□□□ 1.93
CPNE1-220ENST00000458038 BICC1Q9H694 974 aaKnown RBP27.09■■□□□ 1.93
CPNE1-220ENST00000458038 ARAP2Q8WZ64 1704 aa27.08■■□□□ 1.93
CPNE1-220ENST00000458038 TNNI2P48788 182 aa27.08■■□□□ 1.93
CPNE1-220ENST00000458038 HDLBPQ00341 1268 aaKnown RBP27.08■■□□□ 1.93
CPNE1-220ENST00000458038 DZIP1LQ8IYY4 767 aaKnown RBP27.08■■□□□ 1.93
CPNE1-220ENST00000458038 R3HDMLQ9H3Y0 253 aa27.08■■□□□ 1.93
CPNE1-220ENST00000458038 MRPL50Q8N5N7 158 aaKnown RBP27.07■■□□□ 1.92
CPNE1-220ENST00000458038 TDRD3Q9H7E2 651 aaKnown RBP27.07■■□□□ 1.92
CPNE1-220ENST00000458038 METTL24Q5JXM2 366 aa27.06■■□□□ 1.92
CPNE1-220ENST00000458038 AOX1Q06278 1338 aa27.06■■□□□ 1.92
CPNE1-220ENST00000458038 FRAT2O75474 233 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms