RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 RIPOR2Q9Y4F9 1068 aa23.39■■□□□ 1.33
UBE2D4-208ENST00000454350 PLIN1O60240 522 aa23.38■■□□□ 1.33
UBE2D4-208ENST00000454350 TAF7LQ5H9L4 462 aa23.38■■□□□ 1.33
UBE2D4-208ENST00000454350 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
UBE2D4-208ENST00000454350 MTMR14Q8NCE2 650 aa23.38■■□□□ 1.33
UBE2D4-208ENST00000454350 PCDHAC2Q9Y5I4 1007 aa23.38■■□□□ 1.33
UBE2D4-208ENST00000454350 FKBP1AP62942 108 aaKnown RBP23.37■■□□□ 1.33
UBE2D4-208ENST00000454350 ABHD8Q96I13 439 aa23.37■■□□□ 1.33
UBE2D4-208ENST00000454350 CSRNP1Q96S65 589 aa23.37■■□□□ 1.33
UBE2D4-208ENST00000454350 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
UBE2D4-208ENST00000454350 HDAC9Q9UKV0 1011 aa23.37■■□□□ 1.33
UBE2D4-208ENST00000454350 UBE4AQ14139 1066 aa23.36■■□□□ 1.33
UBE2D4-208ENST00000454350 AOX1Q06278 1338 aa23.35■■□□□ 1.33
UBE2D4-208ENST00000454350 FAM205AQ6ZU69 1335 aa23.35■■□□□ 1.33
UBE2D4-208ENST00000454350 UBE2Q2LH0YL09 131 aa23.35■■□□□ 1.33
UBE2D4-208ENST00000454350 TDRD7Q8NHU6 1098 aaKnown RBP23.35■■□□□ 1.33
UBE2D4-208ENST00000454350 FAM84BQ96KN1 310 aaPredicted RBP23.35■■□□□ 1.33
UBE2D4-208ENST00000454350 ALDH1L2Q3SY69 923 aa23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 APOBEC3FQ8IUX4 373 aaKnown RBP23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 RNF186Q9NXI6 227 aa23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 SAGE1Q9NXZ1 904 aa23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 JAG2Q9Y219 1238 aa23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 LAMB1P07942 1786 aa23.34■■□□□ 1.33
UBE2D4-208ENST00000454350 GYG1P46976 350 aa23.33■■□□□ 1.33
UBE2D4-208ENST00000454350 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
UBE2D4-208ENST00000454350 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
UBE2D4-208ENST00000454350 SSC5DA1L4H1 1573 aa23.32■■□□□ 1.32
UBE2D4-208ENST00000454350 COL1A1P02452 1464 aaPredicted RBP23.32■■□□□ 1.32
UBE2D4-208ENST00000454350 DLGAP5Q15398 846 aa23.32■■□□□ 1.32
UBE2D4-208ENST00000454350 PRMT6Q96LA8 375 aaPredicted RBP23.32■■□□□ 1.32
UBE2D4-208ENST00000454350 MROH5Q6ZUA9 1318 aa23.32■■□□□ 1.32
UBE2D4-208ENST00000454350 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
UBE2D4-208ENST00000454350 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
UBE2D4-208ENST00000454350 CCER2I3L3R5 266 aa23.31■■□□□ 1.32
UBE2D4-208ENST00000454350 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
UBE2D4-208ENST00000454350 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
UBE2D4-208ENST00000454350 MYH13Q9UKX3 1938 aa23.3■■□□□ 1.32
UBE2D4-208ENST00000454350 HIBADHP31937 336 aaKnown RBP23.3■■□□□ 1.32
UBE2D4-208ENST00000454350 FBXO33Q7Z6M2 555 aa23.3■■□□□ 1.32
UBE2D4-208ENST00000454350 KLHDC4Q8TBB5 520 aa23.3■■□□□ 1.32
UBE2D4-208ENST00000454350 DEFB129Q9H1M3 183 aa23.3■■□□□ 1.32
UBE2D4-208ENST00000454350 TRPA1O75762 1119 aa23.29■■□□□ 1.32
UBE2D4-208ENST00000454350 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
UBE2D4-208ENST00000454350 PTPN12Q05209 780 aaKnown RBP23.29■■□□□ 1.32
UBE2D4-208ENST00000454350 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
UBE2D4-208ENST00000454350 MCOLN1Q9GZU1 580 aa23.28■■□□□ 1.32
UBE2D4-208ENST00000454350 SMC4Q9NTJ3 1288 aa23.28■■□□□ 1.32
UBE2D4-208ENST00000454350 FZD1Q9UP38 647 aa23.28■■□□□ 1.32
UBE2D4-208ENST00000454350 OTOFQ9HC10 1997 aa23.27■■□□□ 1.32
UBE2D4-208ENST00000454350 CLRN2A0PK11 232 aa23.27■■□□□ 1.32
UBE2D4-208ENST00000454350 NF2P35240 595 aa23.27■■□□□ 1.32
UBE2D4-208ENST00000454350 MFSD14BQ5SR56 506 aa23.27■■□□□ 1.32
UBE2D4-208ENST00000454350 REM2Q8IYK8 340 aaPredicted RBP23.27■■□□□ 1.32
UBE2D4-208ENST00000454350 PDE8BO95263 885 aa23.26■■□□□ 1.31
UBE2D4-208ENST00000454350 CT47B1P0C2W7 299 aaPredicted RBP23.26■■□□□ 1.31
UBE2D4-208ENST00000454350 TTLL12Q14166 644 aaPredicted RBP23.26■■□□□ 1.31
UBE2D4-208ENST00000454350 GRIK5Q16478 980 aa23.26■■□□□ 1.31
UBE2D4-208ENST00000454350 FGFR2P21802 821 aa23.25■■□□□ 1.31
UBE2D4-208ENST00000454350 PRKG1Q13976 671 aa23.25■■□□□ 1.31
UBE2D4-208ENST00000454350 MAP3K11Q16584 847 aa23.25■■□□□ 1.31
UBE2D4-208ENST00000454350 METTL24Q5JXM2 366 aa23.25■■□□□ 1.31
UBE2D4-208ENST00000454350 TM4SF4P48230 202 aa23.24■■□□□ 1.31
UBE2D4-208ENST00000454350 ARMC9Q7Z3E5 817 aa23.24■■□□□ 1.31
UBE2D4-208ENST00000454350 NOB1Q9ULX3 412 aaKnown RBP23.24■■□□□ 1.31
UBE2D4-208ENST00000454350 TTF2Q9UNY4 1162 aaKnown RBP23.24■■□□□ 1.31
UBE2D4-208ENST00000454350 PPP2R3BQ9Y5P8 575 aa23.24■■□□□ 1.31
UBE2D4-208ENST00000454350 DGKZQ13574 1117 aa23.23■■□□□ 1.31
UBE2D4-208ENST00000454350 SERPINA10Q9UK55 444 aa23.23■■□□□ 1.31
UBE2D4-208ENST00000454350 ANGEL1Q9UNK9 670 aaKnown RBP23.23■■□□□ 1.31
UBE2D4-208ENST00000454350 IQSEC3Q9UPP2 1182 aaPredicted RBP23.23■■□□□ 1.31
UBE2D4-208ENST00000454350 SPDYE2Q495Y8 402 aa23.22■■□□□ 1.31
UBE2D4-208ENST00000454350 NBPF12Q5TAG4 269 aaPredicted RBP23.22■■□□□ 1.31
UBE2D4-208ENST00000454350 ATG9AQ7Z3C6 839 aa23.22■■□□□ 1.31
UBE2D4-208ENST00000454350 EYA2O00167 538 aa23.21■■□□□ 1.31
UBE2D4-208ENST00000454350 MYO1BO43795 1136 aa23.21■■□□□ 1.31
UBE2D4-208ENST00000454350 BCAMP50895 628 aa23.21■■□□□ 1.31
UBE2D4-208ENST00000454350 ZNF70Q9UC06 446 aaPredicted RBP23.21■■□□□ 1.31
UBE2D4-208ENST00000454350 KIF16BQ96L93 1317 aa23.21■■□□□ 1.31
UBE2D4-208ENST00000454350 CRKP46108 304 aa23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 RBM5P52756 815 aaKnown RBP eCLIP23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 MKRN3Q13064 507 aaKnown RBP23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 RASA3Q14644 834 aa23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 SPRYD7Q5W111 196 aa23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 DZIP1LQ8IYY4 767 aaKnown RBP23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 CLMNQ96JQ2 1002 aa23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 TDRD3Q9H7E2 651 aaKnown RBP23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 VEZTQ9HBM0 779 aa23.2■■□□□ 1.3
UBE2D4-208ENST00000454350 CCDC85CA6NKD9 419 aa23.19■■□□□ 1.3
UBE2D4-208ENST00000454350 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
UBE2D4-208ENST00000454350 CAVIN4Q5BKX8 364 aa23.19■■□□□ 1.3
UBE2D4-208ENST00000454350 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
UBE2D4-208ENST00000454350 TEPSINQ96N21 525 aa23.19■■□□□ 1.3
UBE2D4-208ENST00000454350 USP2O75604 605 aaPredicted RBP23.18■■□□□ 1.3
UBE2D4-208ENST00000454350 UBTFL1P0CB47 393 aaPredicted RBP23.18■■□□□ 1.3
UBE2D4-208ENST00000454350 VPS37DQ86XT2 251 aa23.18■■□□□ 1.3
UBE2D4-208ENST00000454350 TBC1D8O95759 1140 aa23.17■■□□□ 1.3
UBE2D4-208ENST00000454350 RGS19P49795 217 aa23.17■■□□□ 1.3
UBE2D4-208ENST00000454350 HDLBPQ00341 1268 aaKnown RBP23.17■■□□□ 1.3
UBE2D4-208ENST00000454350 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms