RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ANAPC16Q96DE5 110 aa6.14□□□□□ -1.43
HMGN3P1-201ENST00000453847 SRPK1Q96SB4 655 aaKnown RBP6.14□□□□□ -1.43
HMGN3P1-201ENST00000453847 SRRTQ9BXP5 876 aaKnown RBP6.14□□□□□ -1.43
HMGN3P1-201ENST00000453847 ZNF576Q9H609 170 aa6.14□□□□□ -1.43
HMGN3P1-201ENST00000453847 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
HMGN3P1-201ENST00000453847 J3QW42 95 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 SMAD7O15105 426 aaKnown RBP6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 PSAPP07602 524 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 SPEM2Q0P670 501 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 APOBRQ0VD83 1088 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 LAMC2Q13753 1193 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 LBRQ14739 615 aaKnown RBP6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 SEZ6Q53EL9 994 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 SNAP47Q5SQN1 464 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 DHX32Q7L7V1 743 aaKnown RBP6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 RAB44Q7Z6P3 723 aaPredicted RBP6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 STK35Q8TDR2 534 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 NSUN5Q96P11 429 aaKnown RBP6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 DEPDC7Q96QD5 511 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 LRRC3Q9BY71 257 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 CEP44Q9C0F1 390 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 MUC3BQ9H195 1237 aa6.13□□□□□ -1.43
HMGN3P1-201ENST00000453847 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 TLR3O15455 904 aaKnown RBP6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 GIPRP48546 466 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 ZNF157P51786 506 aaPredicted RBP6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 RPS26P62854 115 aaKnown RBP6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 ATP11AP98196 1134 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 PLAURQ03405 335 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 SCARF1Q14162 830 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 PTPROQ16827 1216 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 MICAL1Q8TDZ2 1067 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 RASSF4Q9H2L5 321 aa6.12□□□□□ -1.43
HMGN3P1-201ENST00000453847 SOBPA7XYQ1 873 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 PDE2AO00408 941 aaPredicted RBP6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 FIGNL1Q6PIW4 674 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 TRPM4Q8TD43 1214 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 KCNB2Q92953 911 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 BHMTQ93088 406 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 PBX4Q9BYU1 374 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 TRIM55Q9BYV6 548 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 TNKS2Q9H2K2 1166 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 ZFYVE1Q9HBF4 777 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 MARK1Q9P0L2 795 aa6.11□□□□□ -1.43
HMGN3P1-201ENST00000453847 ROBO2Q9HCK4 1378 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 LOC102724428A0A0B4J2F2 783 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 CILPO75339 1184 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 CD33P20138 364 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 NRLP54845 237 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 SIK1P57059 783 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 MLLT1Q03111 559 aaPredicted RBP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 CLCQ05315 142 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 ZNF423Q2M1K9 1284 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 PLEKHG4Q58EX7 1191 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 RIPOR1Q6ZS17 1223 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 GRIN3AQ8TCU5 1115 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 GATAD2BQ8WXI9 593 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 ABHD17AQ96GS6 310 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 PNMA5Q96PV4 448 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 DNAJC7Q99615 494 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 NUCKS1Q9H1E3 243 aaKnown RBP6.1□□□□□ -1.43
HMGN3P1-201ENST00000453847 RAB11FIP3O75154 756 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 SEPT6Q14141 434 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 CCDC84Q86UT8 332 aaPredicted RBP6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 SH3TC2Q8TF17 1288 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 EFCC1Q9HA90 598 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 BRMS1Q9HCU9 246 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 ST7Q9NRC1 585 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 IFT57Q9NWB7 429 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 PDZRN3Q9UPQ7 1066 aa6.09□□□□□ -1.43
HMGN3P1-201ENST00000453847 FAM187AA6NFU0 413 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 CCDC85CA6NKD9 419 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 EIF6P56537 245 aaKnown RBP6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 GPLD1P80108 840 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 PTSQ03393 145 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 CWC22Q9HCG8 908 aaKnown RBP6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 TMEM39AQ9NV64 488 aa6.08□□□□□ -1.44
HMGN3P1-201ENST00000453847 SELPP16109 830 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 CTBSQ01459 385 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 SQSTM1Q13501 440 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 MPP2Q14168 576 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 DDR2Q16832 855 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 REC114Q7Z4M0 266 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 TRIM22Q8IYM9 498 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 RBBP8NLQ8NC74 664 aaPredicted RBP6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 GAL3ST3Q96A11 431 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms