RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
VPS16-205ENST00000453689 SASH1O94885 1247 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 BCAMP50895 628 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 POLA2Q14181 598 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 KIAA0825Q8IV33 1275 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 CERS5Q8N5B7 392 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 MYOZ2Q9NPC6 264 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 JAG2Q9Y219 1238 aa18.16■□□□□ 0.5
VPS16-205ENST00000453689 FKBP1AP62942 108 aaKnown RBP18.15■□□□□ 0.5
VPS16-205ENST00000453689 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
VPS16-205ENST00000453689 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
VPS16-205ENST00000453689 FMR1Q06787 632 aaKnown RBP eCLIP18.14■□□□□ 0.49
VPS16-205ENST00000453689 TFCP2Q12800 502 aa18.14■□□□□ 0.49
VPS16-205ENST00000453689 CEP85Q6P2H3 762 aa18.14■□□□□ 0.49
VPS16-205ENST00000453689 OGFOD1Q8N543 542 aa18.14■□□□□ 0.49
VPS16-205ENST00000453689 GLIS2Q9BZE0 524 aaPredicted RBP18.14■□□□□ 0.49
VPS16-205ENST00000453689 TRAF5O00463 557 aa18.13■□□□□ 0.49
VPS16-205ENST00000453689 HDAC9Q9UKV0 1011 aa18.13■□□□□ 0.49
VPS16-205ENST00000453689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.13■□□□□ 0.49
VPS16-205ENST00000453689 ASTN2O75129 1339 aaPredicted RBP18.13■□□□□ 0.49
VPS16-205ENST00000453689 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
VPS16-205ENST00000453689 MYH2Q9UKX2 1941 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 FRAT2O75474 233 aaPredicted RBP18.12■□□□□ 0.49
VPS16-205ENST00000453689 MMP14P50281 582 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
VPS16-205ENST00000453689 AAMPQ13685 434 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 SCARF1Q14162 830 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 CDC37L1Q7L3B6 337 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 CREBZFQ9NS37 354 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 GGA3Q9NZ52 723 aa18.12■□□□□ 0.49
VPS16-205ENST00000453689 COL1A1P02452 1464 aaPredicted RBP18.12■□□□□ 0.49
VPS16-205ENST00000453689 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 TMEM88BA6NKF7 163 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 F8W031 263 aaPredicted RBP18.11■□□□□ 0.49
VPS16-205ENST00000453689 ADORA1P30542 326 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 TIMM10P62072 90 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 CHAF1AQ13111 956 aaPredicted RBP18.11■□□□□ 0.49
VPS16-205ENST00000453689 DNAJC5GQ8N7S2 189 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 DCPSQ96C86 337 aaKnown RBP18.11■□□□□ 0.49
VPS16-205ENST00000453689 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
VPS16-205ENST00000453689 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
VPS16-205ENST00000453689 WNT10BO00744 389 aa18.1■□□□□ 0.49
VPS16-205ENST00000453689 NEFLP07196 543 aa18.1■□□□□ 0.49
VPS16-205ENST00000453689 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
VPS16-205ENST00000453689 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
VPS16-205ENST00000453689 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
VPS16-205ENST00000453689 NOP58Q9Y2X3 529 aaKnown RBP18.1■□□□□ 0.49
VPS16-205ENST00000453689 ADM5C9JUS6 153 aa18.09■□□□□ 0.49
VPS16-205ENST00000453689 SURF6O75683 361 aaKnown RBP18.09■□□□□ 0.49
VPS16-205ENST00000453689 PHKA1P46020 1223 aa18.09■□□□□ 0.49
VPS16-205ENST00000453689 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
VPS16-205ENST00000453689 PITPNM2Q9BZ72 1349 aa18.08■□□□□ 0.49
VPS16-205ENST00000453689 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.48
VPS16-205ENST00000453689 CST9Q5W186 159 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 DLK2Q6UY11 383 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 RPAP2Q8IXW5 612 aaPredicted RBP18.08■□□□□ 0.48
VPS16-205ENST00000453689 MTMR14Q8NCE2 650 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 TBC1D22AQ8WUA7 517 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 XAGE2Q96GT9 111 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 ZBED3Q96IU2 234 aaPredicted RBP18.08■□□□□ 0.48
VPS16-205ENST00000453689 PCDHAC2Q9Y5I4 1007 aa18.08■□□□□ 0.48
VPS16-205ENST00000453689 DLGAP5Q15398 846 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 GRIK5Q16478 980 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 CFAP100Q494V2 611 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 CCDC102BQ68D86 513 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 NEUROD6Q96NK8 337 aa18.07■□□□□ 0.48
VPS16-205ENST00000453689 GNL3LQ9NVN8 582 aaKnown RBP18.07■□□□□ 0.48
VPS16-205ENST00000453689 TTF2Q9UNY4 1162 aaKnown RBP18.07■□□□□ 0.48
VPS16-205ENST00000453689 CELF2O95319 508 aaKnown RBP18.06■□□□□ 0.48
VPS16-205ENST00000453689 SIRT2Q8IXJ6 389 aa18.06■□□□□ 0.48
VPS16-205ENST00000453689 KLRG1Q96E93 195 aa18.06■□□□□ 0.48
VPS16-205ENST00000453689 ZNF408Q9H9D4 720 aa18.06■□□□□ 0.48
VPS16-205ENST00000453689 SCAF8Q9UPN6 1271 aaKnown RBP18.06■□□□□ 0.48
VPS16-205ENST00000453689 ZBTB22O15209 634 aa18.05■□□□□ 0.48
VPS16-205ENST00000453689 WDR66Q8TBY9 1149 aa18.05■□□□□ 0.48
VPS16-205ENST00000453689 GPR108Q9NPR9 543 aa18.05■□□□□ 0.48
VPS16-205ENST00000453689 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
VPS16-205ENST00000453689 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
VPS16-205ENST00000453689 CNTNAP1P78357 1384 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 AK9Q5TCS8 1911 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 SPDYE2BA6NHP3 402 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 SEMA3EO15041 775 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 HMMRO75330 724 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 SPDYE6P0CI01 402 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 TNNI3KQ59H18 835 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 PRMT6Q96LA8 375 aaPredicted RBP18.04■□□□□ 0.48
VPS16-205ENST00000453689 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
VPS16-205ENST00000453689 SERPINA10Q9UK55 444 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 ABT1Q9ULW3 272 aaKnown RBP18.04■□□□□ 0.48
VPS16-205ENST00000453689 PCDHB15Q9Y5E8 787 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 FPGT-TNNI3KV9GXZ4 949 aa18.04■□□□□ 0.48
VPS16-205ENST00000453689 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms