RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RRP1P56182 461 aaKnown RBP21.29■■□□□ 1
PRPF40A-204ENST00000450303 UBE4AQ14139 1066 aa21.29■■□□□ 1
PRPF40A-204ENST00000450303 METTL24Q5JXM2 366 aa21.29■■□□□ 1
PRPF40A-204ENST00000450303 C2orf69Q8N8R5 385 aa21.29■■□□□ 1
PRPF40A-204ENST00000450303 MROH5Q6ZUA9 1318 aa21.29■■□□□ 1
PRPF40A-204ENST00000450303 WNT10BO00744 389 aa21.28■■□□□ 1
PRPF40A-204ENST00000450303 PRAMEF18Q5VWM3 479 aa21.28■■□□□ 1
PRPF40A-204ENST00000450303 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
PRPF40A-204ENST00000450303 HDAC9Q9UKV0 1011 aa21.28■■□□□ 1
PRPF40A-204ENST00000450303 UBTFL1P0CB47 393 aaPredicted RBP21.27■■□□□ 1
PRPF40A-204ENST00000450303 MAP2K1Q02750 393 aaPredicted RBP21.27■■□□□ 1
PRPF40A-204ENST00000450303 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
PRPF40A-204ENST00000450303 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
PRPF40A-204ENST00000450303 HIBADHP31937 336 aaKnown RBP21.26■□□□□ 0.99
PRPF40A-204ENST00000450303 RFX5P48382 616 aaPredicted RBP21.26■□□□□ 0.99
PRPF40A-204ENST00000450303 PCDHAC2Q9Y5I4 1007 aa21.26■□□□□ 0.99
PRPF40A-204ENST00000450303 PITPNM2Q9BZ72 1349 aa21.26■□□□□ 0.99
PRPF40A-204ENST00000450303 CTCFP49711 727 aaPredicted RBP21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 TNS4Q8IZW8 715 aa21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 TDRD7Q8NHU6 1098 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 IQSEC3Q9UPP2 1182 aaPredicted RBP21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 TNNQ9UQP3 1299 aa21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 THSD7BQ9C0I4 1608 aa21.25■□□□□ 0.99
PRPF40A-204ENST00000450303 PDE8BO95263 885 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 MAP2K2P36507 400 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 LBX1P52954 281 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 PDE3AQ14432 1141 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 RGMBQ6NW40 437 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 ZIC5Q96T25 663 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 MEIS3Q99687 375 aa21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
PRPF40A-204ENST00000450303 TRIM27P14373 513 aa21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 MMP14P50281 582 aa21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 PTPN12Q05209 780 aaKnown RBP21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 DLGAP5Q15398 846 aa21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 MOB2Q70IA6 237 aa21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 VGLL2Q8N8G2 317 aa21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 ZBED3Q96IU2 234 aaPredicted RBP21.23■□□□□ 0.99
PRPF40A-204ENST00000450303 EYA2O00167 538 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 HSPA8P11142 646 aaKnown RBP21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 ZNF157P51786 506 aaPredicted RBP21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 FKBP1AP62942 108 aaKnown RBP21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 CFAP100Q494V2 611 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 BEGAINQ9BUH8 593 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 SIL1Q9H173 461 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 FAM205AQ6ZU69 1335 aa21.22■□□□□ 0.99
PRPF40A-204ENST00000450303 CHAF1AQ13111 956 aaPredicted RBP21.21■□□□□ 0.99
PRPF40A-204ENST00000450303 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
PRPF40A-204ENST00000450303 FBXO33Q7Z6M2 555 aa21.21■□□□□ 0.99
PRPF40A-204ENST00000450303 TSKSQ9UJT2 592 aa21.21■□□□□ 0.99
PRPF40A-204ENST00000450303 BCAMP50895 628 aa21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 RBM5P52756 815 aaKnown RBP eCLIP21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 CAVIN4Q5BKX8 364 aa21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 MFSD14BQ5SR56 506 aa21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 ATG9AQ7Z3C6 839 aa21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 CLUAP1Q96AJ1 413 aa21.2■□□□□ 0.98
PRPF40A-204ENST00000450303 CLRN2A0PK11 232 aa21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 FAM155AB1AL88 458 aaPredicted RBP21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 UBE2Q2LH0YL09 131 aa21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 FRAT2O75474 233 aaPredicted RBP21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 NOGQ13253 232 aa21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 TTLL12Q14166 644 aaPredicted RBP21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 PRMT6Q96LA8 375 aaPredicted RBP21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 PRDM10Q9NQV6 1147 aa21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 AOX1Q06278 1338 aa21.19■□□□□ 0.98
PRPF40A-204ENST00000450303 FGFR2P21802 821 aa21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 PRKG1Q13976 671 aa21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 PUM3Q15397 648 aaKnown RBP21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 GRIK5Q16478 980 aa21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 APOBEC3FQ8IUX4 373 aaKnown RBP21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 MTMR14Q8NCE2 650 aa21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 TTF2Q9UNY4 1162 aaKnown RBP21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 ECM29Q5VYK3 1845 aa21.18■□□□□ 0.98
PRPF40A-204ENST00000450303 CAPN15O75808 1086 aa21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 IFIT1P09914 478 aaKnown RBP21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 KIF23Q02241 960 aaPredicted RBP21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 CCDC102AQ96A19 550 aa21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 HDAC5Q9UQL6 1122 aa21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 PAPPA2Q9BXP8 1791 aa21.17■□□□□ 0.98
PRPF40A-204ENST00000450303 SPDYE2BA6NHP3 402 aa21.16■□□□□ 0.98
PRPF40A-204ENST00000450303 SPDYE6P0CI01 402 aa21.16■□□□□ 0.98
PRPF40A-204ENST00000450303 VEZTQ9HBM0 779 aa21.16■□□□□ 0.98
PRPF40A-204ENST00000450303 MYO1BO43795 1136 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 GNAI3P08754 354 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 SLC10A3P09131 477 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 SLC5A1P13866 664 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 NF2P35240 595 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 FKBP1BP68106 108 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 DEFB129Q9H1M3 183 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 CEP126Q9P2H0 1117 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 FZD1Q9UP38 647 aa21.15■□□□□ 0.98
PRPF40A-204ENST00000450303 CIAO1O76071 339 aa21.14■□□□□ 0.97
PRPF40A-204ENST00000450303 ITPRIPQ8IWB1 547 aa21.14■□□□□ 0.97
PRPF40A-204ENST00000450303 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms