RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
DDX39B-211ENST00000449757 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 PCDHAC2Q9Y5I4 1007 aa13.12□□□□□ -0.31
DDX39B-211ENST00000449757 KIAA0100Q14667 2235 aaKnown RBP13.11□□□□□ -0.31
DDX39B-211ENST00000449757 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-211ENST00000449757 PLIN1O60240 522 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 CASP7P55210 303 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
DDX39B-211ENST00000449757 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 CERS5Q8N5B7 392 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 ZBED3Q96IU2 234 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-211ENST00000449757 WNK4Q96J92 1243 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
DDX39B-211ENST00000449757 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
DDX39B-211ENST00000449757 CSF1RP07333 972 aa13.1□□□□□ -0.31
DDX39B-211ENST00000449757 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
DDX39B-211ENST00000449757 LDLRAD1Q5T700 205 aa13.1□□□□□ -0.31
DDX39B-211ENST00000449757 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
DDX39B-211ENST00000449757 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-211ENST00000449757 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
DDX39B-211ENST00000449757 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 F6X3S4 739 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDX39B-211ENST00000449757 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-211ENST00000449757 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 CFHR5Q9BXR6 569 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
DDX39B-211ENST00000449757 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-211ENST00000449757 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-211ENST00000449757 AOX1Q06278 1338 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 IL16Q14005 1332 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.32
DDX39B-211ENST00000449757 CENPFP49454 3210 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 IL1R1P14778 569 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 INHBEP58166 350 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
DDX39B-211ENST00000449757 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 HTTP42858 3142 aa13.07□□□□□ -0.32
DDX39B-211ENST00000449757 FOXO4P98177 505 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
DDX39B-211ENST00000449757 CRHR2Q13324 411 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 RASA3Q14644 834 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 C15orf52Q6ZUT6 534 aaKnown RBP13.06□□□□□ -0.32
DDX39B-211ENST00000449757 ANKRD13AQ8IZ07 590 aa13.06□□□□□ -0.32
DDX39B-211ENST00000449757 GJA5P36382 358 aa13.05□□□□□ -0.32
DDX39B-211ENST00000449757 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
DDX39B-211ENST00000449757 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
DDX39B-211ENST00000449757 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-211ENST00000449757 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
DDX39B-211ENST00000449757 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
DDX39B-211ENST00000449757 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 GRM8O00222 908 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 VAMP4O75379 141 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
DDX39B-211ENST00000449757 GYG1P46976 350 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
DDX39B-211ENST00000449757 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
DDX39B-211ENST00000449757 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
DDX39B-211ENST00000449757 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
DDX39B-211ENST00000449757 BRCA2P51587 3418 aa13.03□□□□□ -0.32
DDX39B-211ENST00000449757 SP3Q02447 781 aa13.03□□□□□ -0.32
DDX39B-211ENST00000449757 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
DDX39B-211ENST00000449757 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
DDX39B-211ENST00000449757 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
DDX39B-211ENST00000449757 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
DDX39B-211ENST00000449757 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
DDX39B-211ENST00000449757 CCL15-CCL14A0A0B4J2E2 113 aa13.02□□□□□ -0.33
DDX39B-211ENST00000449757 UNCXA6NJT0 531 aa13.02□□□□□ -0.33
DDX39B-211ENST00000449757 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
DDX39B-211ENST00000449757 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
DDX39B-211ENST00000449757 TNNI2P48788 182 aa13.02□□□□□ -0.33
DDX39B-211ENST00000449757 TAF1CQ15572 869 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms