RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 F8W031 263 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-204ENST00000446876 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
HDAC4-204ENST00000446876 TFCP2Q12800 502 aa18.42■□□□□ 0.54
HDAC4-204ENST00000446876 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
HDAC4-204ENST00000446876 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
HDAC4-204ENST00000446876 LPIN2Q92539 896 aa18.42■□□□□ 0.54
HDAC4-204ENST00000446876 SASH1O94885 1247 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 ADORA1P30542 326 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 CHAF1AQ13111 956 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-204ENST00000446876 POLA2Q14181 598 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 ZC3H15Q8WU90 426 aaKnown RBP18.41■□□□□ 0.54
HDAC4-204ENST00000446876 GGA3Q9NZ52 723 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 CEP350Q5VT06 3117 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
HDAC4-204ENST00000446876 COL1A1P02452 1464 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-204ENST00000446876 SCARF1Q14162 830 aa18.4■□□□□ 0.54
HDAC4-204ENST00000446876 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
HDAC4-204ENST00000446876 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
HDAC4-204ENST00000446876 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-204ENST00000446876 NBPF9Q3BBW0 867 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 MFSD14BQ5SR56 506 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 ANGEL2Q5VTE6 544 aaKnown RBP18.39■□□□□ 0.53
HDAC4-204ENST00000446876 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 OGFOD1Q8N543 542 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-204ENST00000446876 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
HDAC4-204ENST00000446876 PCDHAC2Q9Y5I4 1007 aa18.39■□□□□ 0.53
HDAC4-204ENST00000446876 ECM29Q5VYK3 1845 aa18.38■□□□□ 0.53
HDAC4-204ENST00000446876 TIMM10P62072 90 aa18.38■□□□□ 0.53
HDAC4-204ENST00000446876 G3BP1Q13283 466 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDAC4-204ENST00000446876 GRIK5Q16478 980 aa18.38■□□□□ 0.53
HDAC4-204ENST00000446876 DNAJC5GQ8N7S2 189 aa18.38■□□□□ 0.53
HDAC4-204ENST00000446876 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
HDAC4-204ENST00000446876 CREBZFQ9NS37 354 aa18.38■□□□□ 0.53
HDAC4-204ENST00000446876 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 TMEM88BA6NKF7 163 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 PHKA1P46020 1223 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 FKBP1AP62942 108 aaKnown RBP18.37■□□□□ 0.53
HDAC4-204ENST00000446876 PDE3AQ14432 1141 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 ZNF408Q9H9D4 720 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
HDAC4-204ENST00000446876 WNT10BO00744 389 aa18.36■□□□□ 0.53
HDAC4-204ENST00000446876 SURF6O75683 361 aaKnown RBP18.36■□□□□ 0.53
HDAC4-204ENST00000446876 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-204ENST00000446876 CST9Q5W186 159 aa18.36■□□□□ 0.53
HDAC4-204ENST00000446876 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
HDAC4-204ENST00000446876 AOX1Q06278 1338 aa18.35■□□□□ 0.53
HDAC4-204ENST00000446876 CELF2O95319 508 aaKnown RBP18.35■□□□□ 0.53
HDAC4-204ENST00000446876 XAGE2Q96GT9 111 aa18.35■□□□□ 0.53
HDAC4-204ENST00000446876 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-204ENST00000446876 MKRN1Q9UHC7 482 aaKnown RBP18.35■□□□□ 0.53
HDAC4-204ENST00000446876 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
HDAC4-204ENST00000446876 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
HDAC4-204ENST00000446876 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 CCDC102BQ68D86 513 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 SULF1Q8IWU6 871 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 KLRG1Q96E93 195 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 NEUROD6Q96NK8 337 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 AKAP2Q9Y2D5 859 aa18.34■□□□□ 0.53
HDAC4-204ENST00000446876 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
HDAC4-204ENST00000446876 ABT1Q9ULW3 272 aaKnown RBP18.33■□□□□ 0.52
HDAC4-204ENST00000446876 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.52
HDAC4-204ENST00000446876 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
HDAC4-204ENST00000446876 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
HDAC4-204ENST00000446876 SIRT2Q8IXJ6 389 aa18.32■□□□□ 0.52
HDAC4-204ENST00000446876 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
HDAC4-204ENST00000446876 GNL3LQ9NVN8 582 aaKnown RBP18.32■□□□□ 0.52
HDAC4-204ENST00000446876 CNTNAP1P78357 1384 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 PITPNM2Q9BZ72 1349 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 MMP14P50281 582 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 PRAMEF18Q5VWM3 479 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
HDAC4-204ENST00000446876 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-204ENST00000446876 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
HDAC4-204ENST00000446876 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
HDAC4-204ENST00000446876 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
HDAC4-204ENST00000446876 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
HDAC4-204ENST00000446876 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
HDAC4-204ENST00000446876 CRKP46108 304 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
HDAC4-204ENST00000446876 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
HDAC4-204ENST00000446876 SERPINA10Q9UK55 444 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
HDAC4-204ENST00000446876 APBB1O00213 710 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 SEMA3EO15041 775 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 PRDX5P30044 214 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 TLR7Q9NYK1 1049 aaKnown RBP18.28■□□□□ 0.52
HDAC4-204ENST00000446876 TLL2Q9Y6L7 1015 aa18.28■□□□□ 0.52
HDAC4-204ENST00000446876 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms