RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 MICALCLQ6ZW33 695 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 KIF22Q14807 665 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 SPAG5Q96R06 1193 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 BACH1O14867 736 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 KCNA6P17658 529 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
FN1-212ENST00000446046 PRPF4BQ13523 1007 aaKnown RBP13.28□□□□□ -0.28
FN1-212ENST00000446046 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 SYCE3A1L190 88 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 SLC4A8Q2Y0W8 1093 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 PPP1R14CQ8TAE6 165 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 GOLGA1Q92805 767 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 TRAPPC8Q9Y2L5 1435 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
FN1-212ENST00000446046 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 HLTFQ14527 1009 aaKnown RBP eCLIP13.28□□□□□ -0.28
FN1-212ENST00000446046 IFT74Q96LB3 600 aa13.28□□□□□ -0.28
FN1-212ENST00000446046 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.28
FN1-212ENST00000446046 CCDC65Q8IXS2 484 aa13.27□□□□□ -0.28
FN1-212ENST00000446046 TRIM6Q9C030 488 aaPredicted RBP13.27□□□□□ -0.28
FN1-212ENST00000446046 KIFAP3Q92845 792 aa13.27□□□□□ -0.28
FN1-212ENST00000446046 ATL3Q6DD88 541 aa13.27□□□□□ -0.28
FN1-212ENST00000446046 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.28
FN1-212ENST00000446046 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
FN1-212ENST00000446046 STMN4Q9H169 189 aaPredicted RBP13.27□□□□□ -0.29
FN1-212ENST00000446046 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
FN1-212ENST00000446046 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
FN1-212ENST00000446046 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
FN1-212ENST00000446046 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
FN1-212ENST00000446046 HOXB7P09629 217 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 SAMD9Q5K651 1589 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 LARGE2Q8N3Y3 721 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 SH3TC1Q8TE82 1336 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 PDE8AO60658 829 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
FN1-212ENST00000446046 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
FN1-212ENST00000446046 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
FN1-212ENST00000446046 CSADQ9Y600 493 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 MAK16Q9BXY0 300 aaKnown RBP13.26□□□□□ -0.29
FN1-212ENST00000446046 CCDC175P0C221 793 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 TBC1D9Q6ZT07 1266 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
FN1-212ENST00000446046 IQCGQ9H095 443 aaKnown RBP13.26□□□□□ -0.29
FN1-212ENST00000446046 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
FN1-212ENST00000446046 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 TCOF1Q13428 1488 aaKnown RBP13.25□□□□□ -0.29
FN1-212ENST00000446046 UFL1O94874 794 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 AS3MTQ9HBK9 375 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 TXNDC16Q9P2K2 825 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 N4BP3O15049 544 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 NUCB1Q02818 461 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
FN1-212ENST00000446046 C6orf163Q5TEZ5 329 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
FN1-212ENST00000446046 BRAPQ7Z569 592 aa13.25□□□□□ -0.29
FN1-212ENST00000446046 CEP63Q96MT8 703 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 DNM2P50570 870 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
FN1-212ENST00000446046 ASIC1P78348 528 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 ATP8B2P98198 1209 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 WDR44Q5JSH3 913 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 OTUD6BQ8N6M0 293 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 TSGA10Q9BZW7 698 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
FN1-212ENST00000446046 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
FN1-212ENST00000446046 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
FN1-212ENST00000446046 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
FN1-212ENST00000446046 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
FN1-212ENST00000446046 ZBED4O75132 1171 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 PSMD1Q99460 953 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 SSFA2P28290 1259 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 GPR162Q16538 588 aa13.23□□□□□ -0.29
FN1-212ENST00000446046 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 318.1 ms