RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 BRF1Q92994 677 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 EHMT1Q9H9B1 1298 aa16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 SAP30BPQ9UHR5 308 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-204ENST00000444061 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 TPM1P09493 284 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 MASTLQ96GX5 879 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 PCMTD1Q96MG8 357 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 HOMER1Q86YM7 354 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 ARMT1Q9H993 441 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 CCDC194A0A1B0GVG4 234 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 GNAQP50148 359 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 LARP6Q9BRS8 491 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-204ENST00000444061 AOX1Q06278 1338 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 ZBTB43O43298 467 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 CHMLP26374 656 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 BCAMP50895 628 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 TPM3P06753 285 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 CCDC102BQ68D86 513 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 ATP5JP18859 108 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 GRAPQ13588 217 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 KIAA0825Q8IV33 1275 aa16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-204ENST00000444061 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 SPON1Q9HCB6 807 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 ZHX3Q9H4I2 956 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 CEP131Q9UPN4 1083 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 CIAO1O76071 339 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 EAF2Q96CJ1 260 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 GPAA1O43292 621 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 TCEANC2Q96MN5 208 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 NDUFB9Q9Y6M9 179 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
SMARCA4-204ENST00000444061 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 BMP2KQ9NSY1 1161 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 PRC1O43663 620 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 MBD3O95983 291 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 H7C1W4 665 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 ANAPC15P60006 121 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 SLC26A6Q9BXS9 759 aa16.4■□□□□ 0.22
SMARCA4-204ENST00000444061 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 TCP10Q12799 353 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 RTN1Q16799 776 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
SMARCA4-204ENST00000444061 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 NFIXQ14938 502 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
SMARCA4-204ENST00000444061 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 MAPKAPK5Q8IW41 473 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 PRKG1Q13976 671 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 ITSN1Q15811 1721 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 NRKQ7Z2Y5 1582 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 C21orf2O43822 256 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 CALM1P0DP23 149 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 CALM2P0DP24 149 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 CALM3P0DP25 149 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 PHKA1P46020 1223 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 SCNN1DP51172 638 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
SMARCA4-204ENST00000444061 NAT10Q9H0A0 1025 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms