RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PODNQ7Z5L7 613 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
HDAC6-210ENST00000441703 OPTNQ96CV9 577 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.09
HDAC6-210ENST00000441703 DEFB129Q9H1M3 183 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 MIS18AQ9NYP9 233 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 PODXL2Q9NZ53 605 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 RIPOR2Q9Y4F9 1068 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 TNFRSF10AO00220 468 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 PER1O15534 1290 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 SGPL1O95470 568 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 CAPN2P17655 700 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 HOXD11P31277 338 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 GTF2A2P52657 109 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 IRX6P78412 446 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 CC2D1BQ5T0F9 858 aaKnown RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 GUCD1Q96NT3 240 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
HDAC6-210ENST00000441703 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 SRRDQ9UH36 339 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 ZBED9Q6R2W3 1325 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 MYPNQ86TC9 1320 aa8.26□□□□□ -1.09
HDAC6-210ENST00000441703 ZSWIM8A7E2V4 1837 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 TLR2O60603 784 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 MAGEA10P43363 369 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-210ENST00000441703 SF3B3Q15393 1217 aaKnown RBP8.25□□□□□ -1.09
HDAC6-210ENST00000441703 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 B4GALNT3Q6L9W6 998 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 NECAB2Q7Z6G3 386 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 MAFAQ8NHW3 353 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-210ENST00000441703 BRI3BPQ8WY22 251 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 LAMA3Q16787 3333 aa8.25□□□□□ -1.09
HDAC6-210ENST00000441703 COL4A1P02462 1669 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 MYO1BO43795 1136 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 SYN1P17600 705 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 OSBPP22059 807 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 ATP2B4P23634 1241 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 PSMC4P43686 418 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 EIF4A1P60842 406 aaKnown RBP8.24□□□□□ -1.09
HDAC6-210ENST00000441703 AIMP1Q12904 312 aaKnown RBP8.24□□□□□ -1.09
HDAC6-210ENST00000441703 DLGAP5Q15398 846 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 DACT2Q5SW24 774 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 FAM109BQ6ICB4 259 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-210ENST00000441703 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 FAM43AQ8N2R8 423 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-210ENST00000441703 ZNF428Q96B54 188 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 CFAP53Q96M91 514 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 XDHP47989 1333 aa8.24□□□□□ -1.09
HDAC6-210ENST00000441703 SSC5DA1L4H1 1573 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-210ENST00000441703 EIF2S2P20042 333 aaKnown RBP8.23□□□□□ -1.09
HDAC6-210ENST00000441703 STRIP1Q5VSL9 837 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 KIAA0825Q8IV33 1275 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 PAWRQ96IZ0 340 aaKnown RBP8.23□□□□□ -1.09
HDAC6-210ENST00000441703 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 VEZTQ9HBM0 779 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 NUDCQ9Y266 331 aa8.23□□□□□ -1.09
HDAC6-210ENST00000441703 U2AF1L5P0DN76 240 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-210ENST00000441703 U2AF1Q01081 240 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC6-210ENST00000441703 MAP3K12Q12852 859 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 NBPF12Q5TAG4 269 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-210ENST00000441703 COPS6Q7L5N1 327 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 FAM89AQ96GI7 184 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 DEFB118Q96PH6 123 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
HDAC6-210ENST00000441703 CSADQ9Y600 493 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 ZNF804BA4D1E1 1349 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 FAM205AQ6ZU69 1335 aa8.22□□□□□ -1.09
HDAC6-210ENST00000441703 ALPK3Q96L96 1907 aa8.21□□□□□ -1.09
HDAC6-210ENST00000441703 CLRN2A0PK11 232 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 POTEB2H3BUK9 544 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 IRS4O14654 1257 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-210ENST00000441703 ANXA1P04083 346 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 CETPP11597 493 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
HDAC6-210ENST00000441703 PRKCZQ05513 592 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 PDIA6Q15084 440 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 TTLL5Q6EMB2 1281 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 XAGE3Q8WTP9 111 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 CDX2Q99626 313 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-210ENST00000441703 COA1Q9GZY4 146 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 CPA4Q9UI42 421 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 MED23Q9ULK4 1368 aa8.21□□□□□ -1.1
HDAC6-210ENST00000441703 ECM29Q5VYK3 1845 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 BTBD19C9JJ37 291 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 INHAP05111 366 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 NEFMP07197 916 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 MS4A1P11836 297 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 FCGRTP55899 365 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 PROSER3Q2NL68 480 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms