RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 FRAT2O75474 233 aaPredicted RBP24.04■■□□□ 1.44
SEMA3B-206ENST00000439487 XAGE2Q96GT9 111 aa24.04■■□□□ 1.44
SEMA3B-206ENST00000439487 FAM205AQ6ZU69 1335 aa24.04■■□□□ 1.44
SEMA3B-206ENST00000439487 PHKA1P46020 1223 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 CHAF1AQ13111 956 aaPredicted RBP24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 USP50Q70EL3 339 aaPredicted RBP24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 SAMD7Q7Z3H4 446 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 CERS5Q8N5B7 392 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 TRPM4Q8TD43 1214 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 PCDHB15Q9Y5E8 787 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 MYO3BQ8WXR4 1341 aa24.03■■□□□ 1.44
SEMA3B-206ENST00000439487 USP17L8P0C7I0 530 aa24.02■■□□□ 1.44
SEMA3B-206ENST00000439487 TBC1D10BQ4KMP7 808 aaPredicted RBP24.02■■□□□ 1.44
SEMA3B-206ENST00000439487 RBM26Q5T8P6 1007 aaKnown RBP24.02■■□□□ 1.44
SEMA3B-206ENST00000439487 LDHDQ86WU2 507 aa24.02■■□□□ 1.44
SEMA3B-206ENST00000439487 GPR108Q9NPR9 543 aa24.02■■□□□ 1.44
SEMA3B-206ENST00000439487 APBB1O00213 710 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 EGFRP00533 1210 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 HIRAP54198 1017 aaPredicted RBP24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 HSP90AB4PQ58FF6 505 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 TNNI3KQ59H18 835 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 CCDC102BQ68D86 513 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 CHADLQ6NUI6 762 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 KIAA0825Q8IV33 1275 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 SMC1BQ8NDV3 1235 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 FPGT-TNNI3KV9GXZ4 949 aa24.01■■□□□ 1.43
SEMA3B-206ENST00000439487 ZNF280AP59817 542 aaPredicted RBP24■■□□□ 1.43
SEMA3B-206ENST00000439487 FKBP1AP62942 108 aaKnown RBP24■■□□□ 1.43
SEMA3B-206ENST00000439487 ERC1Q8IUD2 1116 aa24■■□□□ 1.43
SEMA3B-206ENST00000439487 GNL3LQ9NVN8 582 aaKnown RBP24■■□□□ 1.43
SEMA3B-206ENST00000439487 MFSD14BQ5SR56 506 aa23.99■■□□□ 1.43
SEMA3B-206ENST00000439487 EXOC6Q8TAG9 804 aa23.99■■□□□ 1.43
SEMA3B-206ENST00000439487 F8W031 263 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 FSTL1Q12841 308 aa23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 KIF4BQ2VIQ3 1234 aa23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 GORABQ5T7V8 394 aa23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 RHPN1Q8TCX5 695 aa23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 COL1A1P02452 1464 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-206ENST00000439487 IRX6P78412 446 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 MAP1SQ66K74 1059 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 OGFOD1Q8N543 542 aa23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 EAF2Q96CJ1 260 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 DBNDD2Q9BQY9 259 aa23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 CCDC8Q9H0W5 538 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 IL1RAPL2Q9NP60 686 aa23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 MYOZ2Q9NPC6 264 aa23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 AKAP11Q9UKA4 1901 aa23.97■■□□□ 1.43
SEMA3B-206ENST00000439487 RAB11FIP3O75154 756 aa23.96■■□□□ 1.43
SEMA3B-206ENST00000439487 KIF1BPQ96EK5 621 aa23.96■■□□□ 1.43
SEMA3B-206ENST00000439487 HDAC9Q9UKV0 1011 aa23.96■■□□□ 1.43
SEMA3B-206ENST00000439487 GRIK5Q16478 980 aa23.95■■□□□ 1.42
SEMA3B-206ENST00000439487 TBC1D22AQ8WUA7 517 aa23.95■■□□□ 1.42
SEMA3B-206ENST00000439487 BCL11AQ9H165 835 aa23.95■■□□□ 1.42
SEMA3B-206ENST00000439487 TLR7Q9NYK1 1049 aaKnown RBP23.95■■□□□ 1.42
SEMA3B-206ENST00000439487 DENND2AQ9ULE3 1009 aa23.95■■□□□ 1.42
SEMA3B-206ENST00000439487 ECM29Q5VYK3 1845 aa23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 SEMA3EO15041 775 aa23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 RASGRF1Q13972 1273 aa23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 AACSQ86V21 672 aa23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 DCTPP1Q9H773 170 aa23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 DBNLQ9UJU6 430 aaKnown RBP23.94■■□□□ 1.42
SEMA3B-206ENST00000439487 CNTROBQ8N137 903 aa23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 WDR66Q8TBY9 1149 aa23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 ZC3H15Q8WU90 426 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 PGAP2Q9UHJ9 254 aa23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 TTF2Q9UNY4 1162 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 MYO5AQ9Y4I1 1855 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-206ENST00000439487 TRPM7Q96QT4 1865 aa23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 ASTN2O75129 1339 aaPredicted RBP23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 ZBTB22O15209 634 aa23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 MMP14P50281 582 aa23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 AAMPQ13685 434 aa23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 SCARF1Q14162 830 aa23.92■■□□□ 1.42
SEMA3B-206ENST00000439487 MYH2Q9UKX2 1941 aa23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 ARID4AP29374 1257 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 NBPF9Q3BBW0 867 aa23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 CCDC158Q5M9N0 1113 aa23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 TTC39AQ5SRH9 613 aa23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 PCDHAC2Q9Y5I4 1007 aa23.91■■□□□ 1.42
SEMA3B-206ENST00000439487 SMARCA5O60264 1052 aaPredicted RBP23.9■■□□□ 1.42
SEMA3B-206ENST00000439487 ITGBL1O95965 494 aaPredicted RBP23.9■■□□□ 1.42
SEMA3B-206ENST00000439487 UQCRFS1P1P0C7P4 283 aa23.9■■□□□ 1.42
SEMA3B-206ENST00000439487 CFAP100Q494V2 611 aa23.9■■□□□ 1.42
SEMA3B-206ENST00000439487 HMG20BQ9P0W2 317 aa23.9■■□□□ 1.42
SEMA3B-206ENST00000439487 WNT10BO00744 389 aa23.89■■□□□ 1.41
SEMA3B-206ENST00000439487 DLGAP5Q15398 846 aa23.89■■□□□ 1.41
SEMA3B-206ENST00000439487 PI16Q6UXB8 463 aa23.89■■□□□ 1.41
SEMA3B-206ENST00000439487 LRRCC1Q9C099 1032 aa23.89■■□□□ 1.41
SEMA3B-206ENST00000439487 GGA3Q9NZ52 723 aa23.89■■□□□ 1.41
SEMA3B-206ENST00000439487 MCAMP43121 646 aa23.88■■□□□ 1.41
SEMA3B-206ENST00000439487 RBM5P52756 815 aaKnown RBP eCLIP23.88■■□□□ 1.416e-12■■■□□ 16.5
SEMA3B-206ENST00000439487 SPATA5Q8NB90 893 aa23.88■■□□□ 1.41
SEMA3B-206ENST00000439487 ZBED3Q96IU2 234 aaPredicted RBP23.88■■□□□ 1.41
SEMA3B-206ENST00000439487 GLIS2Q9BZE0 524 aaPredicted RBP23.88■■□□□ 1.41
SEMA3B-206ENST00000439487 SUGT1Q9Y2Z0 365 aa23.88■■□□□ 1.41
SEMA3B-206ENST00000439487 PDS5AQ29RF7 1337 aaKnown RBP23.87■■□□□ 1.41
SEMA3B-206ENST00000439487 SALL1Q9NSC2 1324 aa23.87■■□□□ 1.41
SEMA3B-206ENST00000439487 HSPA6P17066 643 aa23.87■■□□□ 1.41
SEMA3B-206ENST00000439487 FMR1Q06787 632 aaKnown RBP eCLIP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms