RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
EDEM1-202ENST00000434243 VPS37DQ86XT2 251 aa16.73■□□□□ 0.27
EDEM1-202ENST00000434243 APOBEC3FQ8IUX4 373 aaKnown RBP16.73■□□□□ 0.27
EDEM1-202ENST00000434243 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
EDEM1-202ENST00000434243 USP44Q9H0E7 712 aa16.73■□□□□ 0.27
EDEM1-202ENST00000434243 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
EDEM1-202ENST00000434243 UBE2Q2LH0YL09 131 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 SLC10A3P09131 477 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
EDEM1-202ENST00000434243 PRKG1Q13976 671 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 LRRC24Q50LG9 513 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
EDEM1-202ENST00000434243 KLHDC4Q8TBB5 520 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
EDEM1-202ENST00000434243 PCNTO95613 3336 aa16.72■□□□□ 0.27
EDEM1-202ENST00000434243 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
EDEM1-202ENST00000434243 MYO1BO43795 1136 aa16.71■□□□□ 0.27
EDEM1-202ENST00000434243 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
EDEM1-202ENST00000434243 CFAP100Q494V2 611 aa16.71■□□□□ 0.27
EDEM1-202ENST00000434243 PSME4Q14997 1843 aa16.7■□□□□ 0.26
EDEM1-202ENST00000434243 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
EDEM1-202ENST00000434243 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
EDEM1-202ENST00000434243 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
EDEM1-202ENST00000434243 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
EDEM1-202ENST00000434243 RASAL3Q86YV0 1011 aa16.7■□□□□ 0.26
EDEM1-202ENST00000434243 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
EDEM1-202ENST00000434243 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
EDEM1-202ENST00000434243 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
EDEM1-202ENST00000434243 PCDHAC2Q9Y5I4 1007 aa16.7■□□□□ 0.26
EDEM1-202ENST00000434243 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
EDEM1-202ENST00000434243 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
EDEM1-202ENST00000434243 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
EDEM1-202ENST00000434243 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 POLR2AP24928 1970 aaKnown RBP16.69■□□□□ 0.26
EDEM1-202ENST00000434243 TRPA1O75762 1119 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 PDE8BO95263 885 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 MTMR14Q8NCE2 650 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 ABHD8Q96I13 439 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 PRMT6Q96LA8 375 aaPredicted RBP16.68■□□□□ 0.26
EDEM1-202ENST00000434243 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 TTF2Q9UNY4 1162 aaKnown RBP16.68■□□□□ 0.26
EDEM1-202ENST00000434243 FAM205AQ6ZU69 1335 aa16.68■□□□□ 0.26
EDEM1-202ENST00000434243 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
EDEM1-202ENST00000434243 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
EDEM1-202ENST00000434243 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
EDEM1-202ENST00000434243 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
EDEM1-202ENST00000434243 ANGEL1Q9UNK9 670 aaKnown RBP16.67■□□□□ 0.26
EDEM1-202ENST00000434243 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
EDEM1-202ENST00000434243 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
EDEM1-202ENST00000434243 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
EDEM1-202ENST00000434243 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
EDEM1-202ENST00000434243 PAPPA2Q9BXP8 1791 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 EYA2O00167 538 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 BCAMP50895 628 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
EDEM1-202ENST00000434243 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
EDEM1-202ENST00000434243 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 FZD1Q9UP38 647 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
EDEM1-202ENST00000434243 SLC5A1P13866 664 aa16.64■□□□□ 0.25
EDEM1-202ENST00000434243 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
EDEM1-202ENST00000434243 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
EDEM1-202ENST00000434243 SIL1Q9H173 461 aa16.64■□□□□ 0.25
EDEM1-202ENST00000434243 SERPINA10Q9UK55 444 aa16.64■□□□□ 0.25
EDEM1-202ENST00000434243 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
EDEM1-202ENST00000434243 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
EDEM1-202ENST00000434243 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
EDEM1-202ENST00000434243 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
EDEM1-202ENST00000434243 DGKZQ13574 1117 aa16.63■□□□□ 0.25
EDEM1-202ENST00000434243 TBC1D22AQ8WUA7 517 aa16.63■□□□□ 0.25
EDEM1-202ENST00000434243 TDRD3Q9H7E2 651 aaKnown RBP16.63■□□□□ 0.25
EDEM1-202ENST00000434243 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
EDEM1-202ENST00000434243 AOX1Q06278 1338 aa16.63■□□□□ 0.25
EDEM1-202ENST00000434243 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
EDEM1-202ENST00000434243 CRKP46108 304 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 RASA3Q14644 834 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 GRIK5Q16478 980 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
EDEM1-202ENST00000434243 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
EDEM1-202ENST00000434243 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
EDEM1-202ENST00000434243 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
EDEM1-202ENST00000434243 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
EDEM1-202ENST00000434243 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
EDEM1-202ENST00000434243 FGFR2P21802 821 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 TNFAIP1Q13829 316 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 MIER1Q8N108 512 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 LPIN2Q92539 896 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 MEIS3Q99687 375 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
EDEM1-202ENST00000434243 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
EDEM1-202ENST00000434243 IPO8O15397 1037 aaKnown RBP16.6■□□□□ 0.25
EDEM1-202ENST00000434243 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms