RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NLRP12P59046 1061 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 IKBKEQ14164 716 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 PRR23CQ6ZRP0 262 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 UBL7Q96S82 380 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
HMGB3P5-201ENST00000428894 A0A1W2PP55 124 aa9.3□□□□□ -0.92
HMGB3P5-201ENST00000428894 SOWAHDA6NJG2 315 aa9.3□□□□□ -0.92
HMGB3P5-201ENST00000428894 ORC1Q13415 861 aa9.3□□□□□ -0.92
HMGB3P5-201ENST00000428894 Q8N3U1 123 aa9.3□□□□□ -0.92
HMGB3P5-201ENST00000428894 CEP41Q9BYV8 373 aa9.3□□□□□ -0.92
HMGB3P5-201ENST00000428894 METTL12A8MUP2 240 aa9.29□□□□□ -0.92
HMGB3P5-201ENST00000428894 BRD1O95696 1058 aa9.29□□□□□ -0.92
HMGB3P5-201ENST00000428894 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
HMGB3P5-201ENST00000428894 NIF3L1Q9GZT8 377 aa9.28□□□□□ -0.92
HMGB3P5-201ENST00000428894 LIN7BQ9HAP6 207 aa9.28□□□□□ -0.92
HMGB3P5-201ENST00000428894 GNEQ9Y223 722 aaKnown RBP9.28□□□□□ -0.92
HMGB3P5-201ENST00000428894 ESRRAP11474 423 aaPredicted RBP9.27□□□□□ -0.93
HMGB3P5-201ENST00000428894 CCNJLQ8IV13 435 aa9.27□□□□□ -0.93
HMGB3P5-201ENST00000428894 BIN2Q9UBW5 565 aaPredicted RBP9.27□□□□□ -0.93
HMGB3P5-201ENST00000428894 A0A096LPE4 126 aa9.26□□□□□ -0.93
HMGB3P5-201ENST00000428894 A0A1W2PPZ6 126 aa9.26□□□□□ -0.93
HMGB3P5-201ENST00000428894 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
HMGB3P5-201ENST00000428894 TCF12Q99081 682 aa9.26□□□□□ -0.93
HMGB3P5-201ENST00000428894 RUSC1Q9BVN2 902 aa9.26□□□□□ -0.93
HMGB3P5-201ENST00000428894 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 GPR182O15218 404 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 IGHA2P01877 340 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 GRIA4P48058 902 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 KIAA0319Q5VV43 1072 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 ARMC10Q8N2F6 343 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 RBCK1Q9BYM8 510 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 EHD4Q9H223 541 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 SOX17Q9H6I2 414 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 NPHS2Q9NP85 383 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 RAXQ9Y2V3 346 aa9.25□□□□□ -0.93
HMGB3P5-201ENST00000428894 EIF1AYO14602 144 aaKnown RBP9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 DHX15O43143 795 aaKnown RBP9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 SART1O43290 800 aaKnown RBP9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 GSTM4Q03013 218 aa9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 XP32Q5T750 250 aa9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 UTP4Q969X6 686 aaKnown RBP9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 FAM46AQ96IP4 442 aaKnown RBP9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 DMRTB1Q96MA1 342 aa9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 USP26Q9BXU7 913 aa9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 DNAJC25Q9H1X3 360 aa9.24□□□□□ -0.93
HMGB3P5-201ENST00000428894 FSTP19883 344 aa9.23□□□□□ -0.93
HMGB3P5-201ENST00000428894 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
HMGB3P5-201ENST00000428894 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
HMGB3P5-201ENST00000428894 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
HMGB3P5-201ENST00000428894 PCDH1Q08174 1060 aa9.22□□□□□ -0.93
HMGB3P5-201ENST00000428894 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
HMGB3P5-201ENST00000428894 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
HMGB3P5-201ENST00000428894 CLEC4MQ9H2X3 399 aaPredicted RBP9.22□□□□□ -0.93
HMGB3P5-201ENST00000428894 MEGF11A6BM72 1044 aa9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 PREPP48147 710 aa9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 ZNF423Q2M1K9 1284 aa9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 DCTN4Q9UJW0 460 aa9.21□□□□□ -0.94
HMGB3P5-201ENST00000428894 LOC100289279A0A1B0GTE1 492 aa9.2□□□□□ -0.94
HMGB3P5-201ENST00000428894 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P5-201ENST00000428894 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
HMGB3P5-201ENST00000428894 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
HMGB3P5-201ENST00000428894 MYRFLQ96LU7 910 aa9.2□□□□□ -0.94
HMGB3P5-201ENST00000428894 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 DLGAP3O95886 979 aa9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 MAPK1P28482 360 aa9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 ARTNQ5T4W7 220 aa9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 TMPRSS13Q9BYE2 586 aa9.19□□□□□ -0.94
HMGB3P5-201ENST00000428894 BMP3P12645 472 aa9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 EXOSC6Q5RKV6 272 aaKnown RBP9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 FAM20CQ8IXL6 584 aa9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 C12orf50Q8NA57 414 aaPredicted RBP9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 RNF112Q9ULX5 631 aa9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
HMGB3P5-201ENST00000428894 GSC2O15499 205 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 GAS2O43903 313 aaKnown RBP9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 IGLV1-40P01703 118 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 ITPKAP23677 461 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 TRIM42Q8IWZ5 723 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 SMG8Q8ND04 991 aaKnown RBP9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 KCNF1Q9H3M0 494 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 C7orf69Q9H7B7 122 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 CYP4F12Q9HCS2 524 aa9.17□□□□□ -0.94
HMGB3P5-201ENST00000428894 HMX2A2RU54 273 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 SUGCTQ9HAC7 445 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 ABCB6Q9NP58 842 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 TRAK1Q9UPV9 953 aa9.16□□□□□ -0.94
HMGB3P5-201ENST00000428894 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 CYP11A1P05108 521 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms