RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
ABCA8-202ENST00000428549 SYTL4Q96C24 671 aaPredicted RBP10.59□□□□□ -0.71
ABCA8-202ENST00000428549 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
ABCA8-202ENST00000428549 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
ABCA8-202ENST00000428549 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
ABCA8-202ENST00000428549 PAPPAQ13219 1627 aa10.59□□□□□ -0.71
ABCA8-202ENST00000428549 NAT1P18440 290 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 CASQ1P31415 396 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
ABCA8-202ENST00000428549 CABP4P57796 275 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 TAGLNQ01995 201 aaKnown RBP10.58□□□□□ -0.72
ABCA8-202ENST00000428549 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 PPM1EQ8WY54 764 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 ARMC5Q96C12 935 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 SLC39A13Q96H72 371 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 TINF2Q9BSI4 451 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 HEG1Q9ULI3 1381 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 PLIN1O60240 522 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 COQ9O75208 318 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 UTP14CQ5TAP6 766 aaKnown RBP10.58□□□□□ -0.72
ABCA8-202ENST00000428549 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
ABCA8-202ENST00000428549 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
ABCA8-202ENST00000428549 MPHOSPH6Q99547 160 aaKnown RBP10.58□□□□□ -0.72
ABCA8-202ENST00000428549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
ABCA8-202ENST00000428549 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
ABCA8-202ENST00000428549 RAD51AP2Q09MP3 1159 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 EZH2Q15910 746 aaKnown RBP10.57□□□□□ -0.72
ABCA8-202ENST00000428549 ZNF790Q6PG37 636 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
ABCA8-202ENST00000428549 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 ACRBPQ8NEB7 543 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 ARHGAP45Q92619 1136 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
ABCA8-202ENST00000428549 UBR2Q8IWV8 1755 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 PES1O00541 588 aaKnown RBP10.56□□□□□ -0.72
ABCA8-202ENST00000428549 MTA2O94776 668 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 PDE6BP35913 854 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 HMGN5P82970 282 aaKnown RBP10.56□□□□□ -0.72
ABCA8-202ENST00000428549 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 SMAP1Q8IYB5 467 aaPredicted RBP10.56□□□□□ -0.72
ABCA8-202ENST00000428549 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
ABCA8-202ENST00000428549 TNS1Q9HBL0 1735 aaKnown RBP10.56□□□□□ -0.72
ABCA8-202ENST00000428549 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
ABCA8-202ENST00000428549 NHSQ6T4R5 1651 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 GPR37O15354 613 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
ABCA8-202ENST00000428549 PDGFRBP09619 1106 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 GSE1Q14687 1217 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 ATF7IPQ6VMQ6 1270 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 LMNTD2Q8IXW0 634 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 TTC5Q8N0Z6 440 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 FRAT1Q92837 279 aaPredicted RBP10.55□□□□□ -0.72
ABCA8-202ENST00000428549 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
ABCA8-202ENST00000428549 TMOD3Q9NYL9 352 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 TTF2Q9UNY4 1162 aaKnown RBP10.55□□□□□ -0.72
ABCA8-202ENST00000428549 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 ITGB4P16144 1822 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 KCNQ3O43525 872 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 DNAJC6O75061 913 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 LONRF1Q17RB8 773 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 MSL1Q68DK7 614 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 PIGBQ92521 554 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 STK31Q9BXU1 1019 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 LZTS1Q9Y250 596 aa10.55□□□□□ -0.72
ABCA8-202ENST00000428549 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
ABCA8-202ENST00000428549 PTPRCP08575 1304 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 IPO5O00410 1097 aaKnown RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 TRIM27P14373 513 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 KCNA2P16389 499 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 CLK1P49759 484 aaKnown RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 EIF5P55010 431 aaKnown RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 TXNRD1Q16881 649 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 C20orf194Q5TEA3 1177 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 FBXO33Q7Z6M2 555 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 CATIPQ7Z7H3 387 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 SMARCC1Q92922 1105 aaPredicted RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 FMNL2Q96PY5 1086 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 ACAD8Q9UKU7 415 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
ABCA8-202ENST00000428549 KCPQ6ZWJ8 1503 aa10.54□□□□□ -0.72
ABCA8-202ENST00000428549 BTAF1O14981 1849 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 SLC39A6Q13433 755 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
ABCA8-202ENST00000428549 ZC3H12AQ5D1E8 599 aaKnown RBP10.53□□□□□ -0.72
ABCA8-202ENST00000428549 ODR4Q5SWX8 454 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 DZIP1LQ8IYY4 767 aaKnown RBP10.53□□□□□ -0.72
ABCA8-202ENST00000428549 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 TSC1Q92574 1164 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms