RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
RCC1-207ENST00000427469 HUNKP57058 714 aa16.45■□□□□ 0.22
RCC1-207ENST00000427469 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
RCC1-207ENST00000427469 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
RCC1-207ENST00000427469 KLHDC4Q8TBB5 520 aa16.45■□□□□ 0.22
RCC1-207ENST00000427469 FAM84BQ96KN1 310 aaPredicted RBP16.45■□□□□ 0.22
RCC1-207ENST00000427469 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
RCC1-207ENST00000427469 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
RCC1-207ENST00000427469 AOX1Q06278 1338 aa16.45■□□□□ 0.22
RCC1-207ENST00000427469 PLIN1O60240 522 aa16.44■□□□□ 0.22
RCC1-207ENST00000427469 FGFR2P21802 821 aa16.44■□□□□ 0.22
RCC1-207ENST00000427469 GYG1P46976 350 aa16.44■□□□□ 0.22
RCC1-207ENST00000427469 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
RCC1-207ENST00000427469 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
RCC1-207ENST00000427469 OGFOD1Q8N543 542 aa16.44■□□□□ 0.22
RCC1-207ENST00000427469 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
RCC1-207ENST00000427469 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
RCC1-207ENST00000427469 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
RCC1-207ENST00000427469 AIDAQ96BJ3 306 aa16.43■□□□□ 0.22
RCC1-207ENST00000427469 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
RCC1-207ENST00000427469 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
RCC1-207ENST00000427469 PDE8BO95263 885 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 NOGQ13253 232 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 INTS3Q68E01 1043 aaKnown RBP16.42■□□□□ 0.22
RCC1-207ENST00000427469 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 MEIS3Q99687 375 aa16.42■□□□□ 0.22
RCC1-207ENST00000427469 SLC10A3P09131 477 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
RCC1-207ENST00000427469 TRIM27P14373 513 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 HIBADHP31937 336 aaKnown RBP16.41■□□□□ 0.22
RCC1-207ENST00000427469 LBX1P52954 281 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 FKBP1BP68106 108 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 GRM1Q13255 1194 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 HDAC9Q9UKV0 1011 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 HTTP42858 3142 aa16.41■□□□□ 0.22
RCC1-207ENST00000427469 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
RCC1-207ENST00000427469 EYA2O00167 538 aa16.4■□□□□ 0.22
RCC1-207ENST00000427469 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
RCC1-207ENST00000427469 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
RCC1-207ENST00000427469 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
RCC1-207ENST00000427469 LRRFIP2Q9Y608 721 aaKnown RBP16.4■□□□□ 0.22
RCC1-207ENST00000427469 BCAR3O75815 825 aa16.39■□□□□ 0.21
RCC1-207ENST00000427469 MFSD14BQ5SR56 506 aa16.39■□□□□ 0.21
RCC1-207ENST00000427469 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
RCC1-207ENST00000427469 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
RCC1-207ENST00000427469 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
RCC1-207ENST00000427469 CIAO1O76071 339 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 MTX1Q13505 466 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
RCC1-207ENST00000427469 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 GRIK5Q16478 980 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 MOB2Q70IA6 237 aa16.38■□□□□ 0.21
RCC1-207ENST00000427469 F8W031 263 aaPredicted RBP16.37■□□□□ 0.21
RCC1-207ENST00000427469 CA12O43570 354 aa16.37■□□□□ 0.21
RCC1-207ENST00000427469 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
RCC1-207ENST00000427469 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
RCC1-207ENST00000427469 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
RCC1-207ENST00000427469 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
RCC1-207ENST00000427469 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
RCC1-207ENST00000427469 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
RCC1-207ENST00000427469 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
RCC1-207ENST00000427469 BCAMP50895 628 aa16.36■□□□□ 0.21
RCC1-207ENST00000427469 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
RCC1-207ENST00000427469 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
RCC1-207ENST00000427469 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
RCC1-207ENST00000427469 CENPFP49454 3210 aa16.36■□□□□ 0.21
RCC1-207ENST00000427469 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 ZBTB22O15209 634 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
RCC1-207ENST00000427469 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
RCC1-207ENST00000427469 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
RCC1-207ENST00000427469 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
RCC1-207ENST00000427469 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 LPIN2Q92539 896 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 SIL1Q9H173 461 aa16.34■□□□□ 0.21
RCC1-207ENST00000427469 TTF2Q9UNY4 1162 aaKnown RBP16.34■□□□□ 0.21
RCC1-207ENST00000427469 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 GNAI3P08754 354 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
RCC1-207ENST00000427469 CRKP46108 304 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 CSRNP1Q96S65 589 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 SAGE1Q9NXZ1 904 aa16.33■□□□□ 0.2
RCC1-207ENST00000427469 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
RCC1-207ENST00000427469 SLC5A1P13866 664 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms