RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 SCARF1Q14162 830 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 BECN1Q14457 450 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 GPR162Q16538 588 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 MTHFSDQ2M296 383 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 BMP2KLQ5H9B9 411 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 FAM196AQ6ZSG2 479 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 LINC00528Q8N1L1 170 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 GCC1Q96CN9 775 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 AGBL1Q96MI9 1066 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 KIF2CQ99661 725 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 C22orf23Q9BZE7 217 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 CHMP4BQ9H444 224 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 NXF1Q9UBU9 619 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 N4BP2Q86UW6 1770 aaPredicted RBP3.4□□□□□ -1.86
LINC00407-201ENST00000426509 H3BM21 787 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SPINT1O43278 529 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 BMP2P12643 396 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 GSPT1P15170 499 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 HOXC9P31274 260 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DDIT3P35638 169 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 NCAPD2Q15021 1401 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 CHRNA2Q15822 529 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ANKRD45Q5TZF3 282 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 CEP85Q6P2H3 762 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 G2E3Q7L622 706 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ANKRD44Q8N8A2 993 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PNMA1Q8ND90 353 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 GAS2L2Q8NHY3 880 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SNX21Q969T3 373 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ARXQ96QS3 562 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 TSEN34Q9BSV6 310 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SLKQ9H2G2 1235 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DCTPP1Q9H773 170 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 UPF2Q9HAU5 1272 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PRM3Q9NNZ6 103 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PGPEP1Q9NXJ5 209 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DNMT3LQ9UJW3 386 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF330Q9Y3S2 320 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PHRF1Q9P1Y6 1649 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PTPRCP08575 1304 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ERBB4Q15303 1308 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SPATA31A1Q5TZJ5 1347 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PLCH1Q4KWH8 1693 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 SLIT3O75094 1523 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NRAPQ86VF7 1730 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TNS3Q68CZ2 1445 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 LTN1O94822 1766 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 HTATSF1O43719 755 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 CTSOP43234 321 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 RAB15P59190 212 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 DHX9Q08211 1270 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NBPF20Q3BBV1 942 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TSGA10IPQ3SY00 556 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TTC22Q5TAA0 569 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TBC1D9Q6ZT07 1266 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PLEKHM2Q8IWE5 1019 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NPAS3Q8IXF0 933 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PHTF2Q8N3S3 785 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 JMYQ8N9B5 988 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NGDNQ8NEJ9 315 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 OTUD7AQ8TE49 926 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 GLMNQ92990 594 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 MEIS3Q99687 375 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 MIS18AQ9NYP9 233 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TSPYL4Q9UJ04 414 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PCDHB9Q9Y5E1 797 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PXDNLA1KZ92 1463 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TRPM3Q9HCF6 1732 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 ADCY9O60503 1353 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MAP3K5Q99683 1374 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 KDM3BQ7LBC6 1761 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 FIGNL2A6NMB9 653 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 TTLL8A6PVC2 850 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 F6X3S4 739 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PIK3CDO00329 1044 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SMARCA5O60264 1052 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MAN1A2O60476 641 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PPFIA3O75145 1194 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CDC45O75419 566 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ADH1AP07327 375 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PTGIRP43119 386 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 AMPHP49418 695 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 RELBQ01201 579 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SLC15A2Q16348 729 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF827Q17R98 1081 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 WASHC4Q2M389 1173 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 NUTM2GQ5VZR2 741 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 HSCBQ8IWL3 235 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 RPAP2Q8IXW5 612 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 C16orf71Q8IYS4 520 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC82Q8N4S0 544 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 IL17REQ8NFR9 667 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 IP6K1Q92551 441 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 UCN2Q96RP3 112 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 INSM2Q96T92 566 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MTFR1LQ9H019 292 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF395Q9H8N7 513 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CYLDQ9NQC7 956 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms