RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 BCL11AQ9H165 835 aa30.08■■■□□ 2.41
VEGFA-209ENST00000425836 AGBL3Q8NEM8 1001 aa30.07■■■□□ 2.4
VEGFA-209ENST00000425836 DPF2Q92785 391 aa30.07■■■□□ 2.4
VEGFA-209ENST00000425836 GCC1Q96CN9 775 aa30.07■■■□□ 2.4
VEGFA-209ENST00000425836 ZBTB22O15209 634 aa30.07■■■□□ 2.4
VEGFA-209ENST00000425836 CHAF1AQ13111 956 aaPredicted RBP30.07■■■□□ 2.4
VEGFA-209ENST00000425836 GPRC5DQ9NZD1 345 aa30.07■■■□□ 2.4
VEGFA-209ENST00000425836 VEGFAP15692 232 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-209ENST00000425836 CERS5Q8N5B7 392 aa30.06■■■□□ 2.4
VEGFA-209ENST00000425836 SEMA3EO15041 775 aa30.05■■■□□ 2.4
VEGFA-209ENST00000425836 NEFLP07196 543 aa30.05■■■□□ 2.4
VEGFA-209ENST00000425836 EPS15P42566 896 aa30.05■■■□□ 2.4
VEGFA-209ENST00000425836 HACL1Q9UJ83 578 aa30.05■■■□□ 2.4
VEGFA-209ENST00000425836 WDR90Q96KV7 1748 aa30.05■■■□□ 2.4
VEGFA-209ENST00000425836 ARAP2Q8WZ64 1704 aa30.04■■■□□ 2.4
VEGFA-209ENST00000425836 IQCA1LA6NCM1 817 aa30.04■■■□□ 2.4
VEGFA-209ENST00000425836 IFIT2P09913 472 aaKnown RBP30.04■■■□□ 2.4
VEGFA-209ENST00000425836 LMOD1P29536 600 aaPredicted RBP30.04■■■□□ 2.4
VEGFA-209ENST00000425836 FKBP1AP62942 108 aaKnown RBP30.04■■■□□ 2.4
VEGFA-209ENST00000425836 CCDC158Q5M9N0 1113 aa30.04■■■□□ 2.4
VEGFA-209ENST00000425836 CNOT7Q9UIV1 285 aaKnown RBP30.04■■■□□ 2.4
VEGFA-209ENST00000425836 DENND2AQ9ULE3 1009 aa30.04■■■□□ 2.4
VEGFA-209ENST00000425836 MYO3BQ8WXR4 1341 aa30.04■■■□□ 2.4
VEGFA-209ENST00000425836 SHTN1A0MZ66 631 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 ARID4AP29374 1257 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-209ENST00000425836 RASGRF1Q13972 1273 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 SMC5Q8IY18 1101 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 COL1A1P02452 1464 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-209ENST00000425836 UQCRFS1P1P0C7P4 283 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 MFSD14BQ5SR56 506 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 TTC39AQ5SRH9 613 aa30.03■■■□□ 2.4
VEGFA-209ENST00000425836 MICALL2Q8IY33 904 aa30.02■■■□□ 2.4
VEGFA-209ENST00000425836 TAF1DQ9H5J8 278 aaPredicted RBP30.02■■■□□ 2.4
VEGFA-209ENST00000425836 KIF3CO14782 793 aa30.01■■■□□ 2.39
VEGFA-209ENST00000425836 ANKRD45Q5TZF3 282 aa30.01■■■□□ 2.39
VEGFA-209ENST00000425836 ZNF512BQ96KM6 892 aaPredicted RBP30.01■■■□□ 2.39
VEGFA-209ENST00000425836 EPHX2P34913 555 aa30■■■□□ 2.39
VEGFA-209ENST00000425836 SCARF1Q14162 830 aa30■■■□□ 2.39
VEGFA-209ENST00000425836 WDR66Q8TBY9 1149 aa30■■■□□ 2.39
VEGFA-209ENST00000425836 TBC1D22AQ8WUA7 517 aa30■■■□□ 2.39
VEGFA-209ENST00000425836 HMG20BQ9P0W2 317 aa30■■■□□ 2.39
VEGFA-209ENST00000425836 H7C1D1 291 aa29.99■■■□□ 2.39
VEGFA-209ENST00000425836 USP17L8P0C7I0 530 aa29.99■■■□□ 2.39
VEGFA-209ENST00000425836 MCAMP43121 646 aa29.99■■■□□ 2.39
VEGFA-209ENST00000425836 KIAA0825Q8IV33 1275 aa29.99■■■□□ 2.39
VEGFA-209ENST00000425836 PDS5AQ29RF7 1337 aaKnown RBP29.98■■■□□ 2.39
VEGFA-209ENST00000425836 PSME4Q14997 1843 aa29.98■■■□□ 2.39
VEGFA-209ENST00000425836 ZNF280AP59817 542 aaPredicted RBP29.98■■■□□ 2.39
VEGFA-209ENST00000425836 GRIK5Q16478 980 aa29.98■■■□□ 2.39
VEGFA-209ENST00000425836 PI16Q6UXB8 463 aa29.98■■■□□ 2.39
VEGFA-209ENST00000425836 SPATA5Q8NB90 893 aa29.98■■■□□ 2.39
VEGFA-209ENST00000425836 ADARB2Q9NS39 739 aaKnown RBP29.98■■■□□ 2.39
VEGFA-209ENST00000425836 ZNF646O15015 1829 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-209ENST00000425836 C16orf71Q8IYS4 520 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-209ENST00000425836 F8W031 263 aaPredicted RBP29.96■■■□□ 2.39
VEGFA-209ENST00000425836 B4GALNT3Q6L9W6 998 aa29.96■■■□□ 2.39
VEGFA-209ENST00000425836 SAMD7Q7Z3H4 446 aa29.95■■■□□ 2.39
VEGFA-209ENST00000425836 OGFOD1Q8N543 542 aa29.95■■■□□ 2.39
VEGFA-209ENST00000425836 SNRKQ9NRH2 765 aa29.95■■■□□ 2.39
VEGFA-209ENST00000425836 ZBTB47Q9UFB7 747 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-209ENST00000425836 SALL1Q9NSC2 1324 aa29.95■■■□□ 2.39
VEGFA-209ENST00000425836 EGFRP00533 1210 aa29.94■■■□□ 2.38
VEGFA-209ENST00000425836 USP50Q70EL3 339 aaPredicted RBP29.94■■■□□ 2.38
VEGFA-209ENST00000425836 PNMA8AQ86V59 439 aaPredicted RBP29.94■■■□□ 2.38
VEGFA-209ENST00000425836 TRPM4Q8TD43 1214 aa29.94■■■□□ 2.38
VEGFA-209ENST00000425836 SUGT1Q9Y2Z0 365 aa29.94■■■□□ 2.38
VEGFA-209ENST00000425836 SCN4AP35499 1836 aa29.93■■■□□ 2.38
VEGFA-209ENST00000425836 MMP14P50281 582 aa29.93■■■□□ 2.38
VEGFA-209ENST00000425836 TBC1D10BQ4KMP7 808 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-209ENST00000425836 RBM26Q5T8P6 1007 aaKnown RBP29.93■■■□□ 2.38
VEGFA-209ENST00000425836 HDAC9Q9UKV0 1011 aa29.93■■■□□ 2.38
VEGFA-209ENST00000425836 TTF2Q9UNY4 1162 aaKnown RBP29.93■■■□□ 2.38
VEGFA-209ENST00000425836 HIRAP54198 1017 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-209ENST00000425836 NUCB1Q02818 461 aa29.92■■■□□ 2.38
VEGFA-209ENST00000425836 EAPPQ56P03 285 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-209ENST00000425836 MYOZ2Q9NPC6 264 aa29.92■■■□□ 2.38
VEGFA-209ENST00000425836 POTEIP0CG38 1075 aa29.91■■■□□ 2.38
VEGFA-209ENST00000425836 POTEJP0CG39 1038 aa29.91■■■□□ 2.38
VEGFA-209ENST00000425836 ZAP70P43403 619 aa29.91■■■□□ 2.38
VEGFA-209ENST00000425836 OTUD7AQ8TE49 926 aaPredicted RBP29.91■■■□□ 2.38
VEGFA-209ENST00000425836 PRDX5P30044 214 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 TBC1D9Q6ZT07 1266 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 ZGPATQ8N5A5 531 aaKnown RBP29.9■■■□□ 2.38
VEGFA-209ENST00000425836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.9■■■□□ 2.38
VEGFA-209ENST00000425836 LNPKQ9C0E8 428 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 ECHDC1Q9NTX5 307 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 ABCF2Q9UG63 623 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 ATP5JP18859 108 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 KIF4BQ2VIQ3 1234 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 CHD1LQ86WJ1 897 aa29.9■■■□□ 2.38
VEGFA-209ENST00000425836 CYP2E1P05181 493 aaPredicted RBP29.89■■■□□ 2.38
VEGFA-209ENST00000425836 LDHBP07195 334 aaKnown RBP29.89■■■□□ 2.38
VEGFA-209ENST00000425836 NDUFB9Q9Y6M9 179 aa29.89■■■□□ 2.38
VEGFA-209ENST00000425836 GPATCH3Q96I76 525 aa29.87■■■□□ 2.37
VEGFA-209ENST00000425836 BOLA2Q9H3K6 86 aa29.87■■■□□ 2.37
VEGFA-209ENST00000425836 SALL3Q9BXA9 1300 aa29.87■■■□□ 2.37
VEGFA-209ENST00000425836 TSHZ3Q63HK5 1081 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 SPTY2D1Q68D10 685 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-209ENST00000425836 LDHDQ86WU2 507 aa29.86■■■□□ 2.37
VEGFA-209ENST00000425836 SERPINA10Q9UK55 444 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms