RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
NUP50-207ENST00000424634 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
NUP50-207ENST00000424634 MROH5Q6ZUA9 1318 aa23.21■■□□□ 1.31
NUP50-207ENST00000424634 TDRD7Q8NHU6 1098 aaKnown RBP23.2■■□□□ 1.3
NUP50-207ENST00000424634 PCDHAC2Q9Y5I4 1007 aa23.2■■□□□ 1.3
NUP50-207ENST00000424634 RFX5P48382 616 aaPredicted RBP23.19■■□□□ 1.3
NUP50-207ENST00000424634 FKBP1AP62942 108 aaKnown RBP23.19■■□□□ 1.3
NUP50-207ENST00000424634 NOGQ13253 232 aa23.19■■□□□ 1.3
NUP50-207ENST00000424634 VGLL2Q8N8G2 317 aa23.19■■□□□ 1.3
NUP50-207ENST00000424634 BEGAINQ9BUH8 593 aa23.19■■□□□ 1.3
NUP50-207ENST00000424634 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
NUP50-207ENST00000424634 FAM205AQ6ZU69 1335 aa23.18■■□□□ 1.3
NUP50-207ENST00000424634 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
NUP50-207ENST00000424634 HIBADHP31937 336 aaKnown RBP23.18■■□□□ 1.3
NUP50-207ENST00000424634 ZNF157P51786 506 aaPredicted RBP23.18■■□□□ 1.3
NUP50-207ENST00000424634 MOB2Q70IA6 237 aa23.18■■□□□ 1.3
NUP50-207ENST00000424634 METTL24Q5JXM2 366 aa23.17■■□□□ 1.3
NUP50-207ENST00000424634 MTMR14Q8NCE2 650 aa23.17■■□□□ 1.3
NUP50-207ENST00000424634 CCDC102AQ96A19 550 aa23.17■■□□□ 1.3
NUP50-207ENST00000424634 PDE8BO95263 885 aa23.16■■□□□ 1.3
NUP50-207ENST00000424634 DLGAP5Q15398 846 aa23.16■■□□□ 1.3
NUP50-207ENST00000424634 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
NUP50-207ENST00000424634 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
NUP50-207ENST00000424634 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
NUP50-207ENST00000424634 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
NUP50-207ENST00000424634 CAPN15O75808 1086 aa23.15■■□□□ 1.3
NUP50-207ENST00000424634 FKBP1BP68106 108 aa23.15■■□□□ 1.3
NUP50-207ENST00000424634 PTPN12Q05209 780 aaKnown RBP23.15■■□□□ 1.3
NUP50-207ENST00000424634 PRMT6Q96LA8 375 aaPredicted RBP23.15■■□□□ 1.3
NUP50-207ENST00000424634 AOX1Q06278 1338 aa23.14■■□□□ 1.3
NUP50-207ENST00000424634 UBE2Q2LH0YL09 131 aa23.14■■□□□ 1.29
NUP50-207ENST00000424634 SLC10A3P09131 477 aa23.14■■□□□ 1.29
NUP50-207ENST00000424634 KIF23Q02241 960 aaPredicted RBP23.14■■□□□ 1.29
NUP50-207ENST00000424634 CFAP100Q494V2 611 aa23.14■■□□□ 1.29
NUP50-207ENST00000424634 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
NUP50-207ENST00000424634 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
NUP50-207ENST00000424634 APOBEC3FQ8IUX4 373 aaKnown RBP23.13■■□□□ 1.29
NUP50-207ENST00000424634 IQSEC3Q9UPP2 1182 aaPredicted RBP23.13■■□□□ 1.29
NUP50-207ENST00000424634 ECM29Q5VYK3 1845 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 SPDYE2BA6NHP3 402 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 EYA2O00167 538 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 SPDYE6P0CI01 402 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 FGFR2P21802 821 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 RASAL3Q86YV0 1011 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 ARHGAP45Q92619 1136 aa23.12■■□□□ 1.29
NUP50-207ENST00000424634 CA12O43570 354 aa23.11■■□□□ 1.29
NUP50-207ENST00000424634 BCAMP50895 628 aa23.11■■□□□ 1.29
NUP50-207ENST00000424634 GRIK5Q16478 980 aa23.11■■□□□ 1.29
NUP50-207ENST00000424634 MEIS3Q99687 375 aa23.11■■□□□ 1.29
NUP50-207ENST00000424634 DEFB129Q9H1M3 183 aa23.11■■□□□ 1.29
NUP50-207ENST00000424634 LRRFIP2Q9Y608 721 aaKnown RBP23.11■■□□□ 1.29
NUP50-207ENST00000424634 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 CLRN2A0PK11 232 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 BCAR3O75815 825 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
NUP50-207ENST00000424634 VPS37DQ86XT2 251 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 CSRNP1Q96S65 589 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 TNNQ9UQP3 1299 aa23.1■■□□□ 1.29
NUP50-207ENST00000424634 TTLL12Q14166 644 aaPredicted RBP23.09■■□□□ 1.29
NUP50-207ENST00000424634 CAVIN4Q5BKX8 364 aa23.09■■□□□ 1.29
NUP50-207ENST00000424634 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
NUP50-207ENST00000424634 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
NUP50-207ENST00000424634 NF2P35240 595 aa23.08■■□□□ 1.29
NUP50-207ENST00000424634 RBM5P52756 815 aaKnown RBP eCLIP23.08■■□□□ 1.29
NUP50-207ENST00000424634 PRKG1Q13976 671 aa23.08■■□□□ 1.29
NUP50-207ENST00000424634 PUM3Q15397 648 aaKnown RBP23.08■■□□□ 1.29
NUP50-207ENST00000424634 SIL1Q9H173 461 aa23.08■■□□□ 1.29
NUP50-207ENST00000424634 FZD1Q9UP38 647 aa23.08■■□□□ 1.29
NUP50-207ENST00000424634 ARAP2Q8WZ64 1704 aa23.08■■□□□ 1.28
NUP50-207ENST00000424634 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
NUP50-207ENST00000424634 CHAF1AQ13111 956 aaPredicted RBP23.07■■□□□ 1.28
NUP50-207ENST00000424634 SERPINA10Q9UK55 444 aa23.07■■□□□ 1.28
NUP50-207ENST00000424634 AKAP11Q9UKA4 1901 aa23.07■■□□□ 1.28
NUP50-207ENST00000424634 MYO1BO43795 1136 aa23.06■■□□□ 1.28
NUP50-207ENST00000424634 IFIT1P09914 478 aaKnown RBP23.06■■□□□ 1.28
NUP50-207ENST00000424634 TRIM27P14373 513 aa23.06■■□□□ 1.28
NUP50-207ENST00000424634 VEZTQ9HBM0 779 aa23.06■■□□□ 1.28
NUP50-207ENST00000424634 RNF186Q9NXI6 227 aa23.06■■□□□ 1.28
NUP50-207ENST00000424634 PA2G4Q9UQ80 394 aaKnown RBP23.06■■□□□ 1.28
NUP50-207ENST00000424634 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
NUP50-207ENST00000424634 FRAT2O75474 233 aaPredicted RBP23.05■■□□□ 1.28
NUP50-207ENST00000424634 CIAO1O76071 339 aa23.05■■□□□ 1.28
NUP50-207ENST00000424634 LDLRAD1Q5T700 205 aa23.05■■□□□ 1.28
NUP50-207ENST00000424634 LPIN2Q92539 896 aa23.05■■□□□ 1.28
NUP50-207ENST00000424634 FBXO3Q9UK99 471 aa23.05■■□□□ 1.28
NUP50-207ENST00000424634 TRPA1O75762 1119 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 CRKP46108 304 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 ARMC9Q7Z3E5 817 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 DZIP1LQ8IYY4 767 aaKnown RBP23.04■■□□□ 1.28
NUP50-207ENST00000424634 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
NUP50-207ENST00000424634 TDRD3Q9H7E2 651 aaKnown RBP23.04■■□□□ 1.28
NUP50-207ENST00000424634 ZNF70Q9UC06 446 aaPredicted RBP23.04■■□□□ 1.28
NUP50-207ENST00000424634 ANGEL1Q9UNK9 670 aaKnown RBP23.04■■□□□ 1.28
NUP50-207ENST00000424634 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 PPP2R3BQ9Y5P8 575 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 SSC5DA1L4H1 1573 aa23.04■■□□□ 1.28
NUP50-207ENST00000424634 IPO8O15397 1037 aaKnown RBP23.03■■□□□ 1.28
NUP50-207ENST00000424634 SLC5A1P13866 664 aa23.03■■□□□ 1.28
NUP50-207ENST00000424634 RASA3Q14644 834 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms