RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SRCIN1Q9C0H9 1055 aa20.44■□□□□ 0.86
COL18A1-205ENST00000423214 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
COL18A1-205ENST00000423214 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
COL18A1-205ENST00000423214 PRKG1Q13976 671 aa20.43■□□□□ 0.86
COL18A1-205ENST00000423214 F8W031 263 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-205ENST00000423214 MYO1BO43795 1136 aa20.42■□□□□ 0.86
COL18A1-205ENST00000423214 MKRN3Q13064 507 aaKnown RBP20.42■□□□□ 0.86
COL18A1-205ENST00000423214 EPHA10Q5JZY3 1008 aa20.42■□□□□ 0.86
COL18A1-205ENST00000423214 ZNF594Q96JF6 807 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-205ENST00000423214 IL1R1P14778 569 aa20.41■□□□□ 0.86
COL18A1-205ENST00000423214 RGS19P49795 217 aa20.41■□□□□ 0.86
COL18A1-205ENST00000423214 SREBF2Q12772 1141 aa20.41■□□□□ 0.86
COL18A1-205ENST00000423214 CTU1Q7Z7A3 348 aaKnown RBP20.41■□□□□ 0.86
COL18A1-205ENST00000423214 CERS5Q8N5B7 392 aa20.41■□□□□ 0.86
COL18A1-205ENST00000423214 ZBED3Q96IU2 234 aaPredicted RBP20.41■□□□□ 0.86
COL18A1-205ENST00000423214 ANGEL1Q9UNK9 670 aaKnown RBP20.41■□□□□ 0.86
COL18A1-205ENST00000423214 FKBP1AP62942 108 aaKnown RBP20.4■□□□□ 0.86
COL18A1-205ENST00000423214 PDE4DIPQ5VU43 2346 aa20.4■□□□□ 0.86
COL18A1-205ENST00000423214 MTMR14Q8NCE2 650 aa20.4■□□□□ 0.86
COL18A1-205ENST00000423214 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
COL18A1-205ENST00000423214 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
COL18A1-205ENST00000423214 SSC5DA1L4H1 1573 aa20.39■□□□□ 0.85
COL18A1-205ENST00000423214 CFAP100Q494V2 611 aa20.39■□□□□ 0.85
COL18A1-205ENST00000423214 DEFB129Q9H1M3 183 aa20.39■□□□□ 0.85
COL18A1-205ENST00000423214 RBM5P52756 815 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL18A1-205ENST00000423214 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
COL18A1-205ENST00000423214 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
COL18A1-205ENST00000423214 VEZTQ9HBM0 779 aa20.38■□□□□ 0.85
COL18A1-205ENST00000423214 CLRN2A0PK11 232 aa20.37■□□□□ 0.85
COL18A1-205ENST00000423214 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
COL18A1-205ENST00000423214 TBC1D8O95759 1140 aa20.37■□□□□ 0.85
COL18A1-205ENST00000423214 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
COL18A1-205ENST00000423214 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-205ENST00000423214 TM4SF4P48230 202 aa20.36■□□□□ 0.85
COL18A1-205ENST00000423214 UBE4AQ14139 1066 aa20.36■□□□□ 0.85
COL18A1-205ENST00000423214 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-205ENST00000423214 PCDHAC2Q9Y5I4 1007 aa20.36■□□□□ 0.85
COL18A1-205ENST00000423214 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
COL18A1-205ENST00000423214 ZNF296Q8WUU4 475 aaPredicted RBP20.35■□□□□ 0.85
COL18A1-205ENST00000423214 FZD1Q9UP38 647 aa20.35■□□□□ 0.85
COL18A1-205ENST00000423214 FAM205AQ6ZU69 1335 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 ZNF521Q96K83 1311 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 TNRC18O15417 2968 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-205ENST00000423214 NBPF7P0C2Y1 421 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-205ENST00000423214 HIBADHP31937 336 aaKnown RBP20.34■□□□□ 0.85
COL18A1-205ENST00000423214 GYG1P46976 350 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 SOX10P56693 466 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 LDLRAD1Q5T700 205 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 SPRYD7Q5W111 196 aa20.34■□□□□ 0.85
COL18A1-205ENST00000423214 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
COL18A1-205ENST00000423214 PTPRCP08575 1304 aa20.33■□□□□ 0.85
COL18A1-205ENST00000423214 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
COL18A1-205ENST00000423214 PKN2Q16513 984 aaKnown RBP20.33■□□□□ 0.85
COL18A1-205ENST00000423214 VPS37DQ86XT2 251 aa20.33■□□□□ 0.85
COL18A1-205ENST00000423214 SLC10A4Q96EP9 437 aa20.33■□□□□ 0.85
COL18A1-205ENST00000423214 PRMT6Q96LA8 375 aaPredicted RBP20.33■□□□□ 0.85
COL18A1-205ENST00000423214 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.85
COL18A1-205ENST00000423214 AK9Q5TCS8 1911 aa20.33■□□□□ 0.84
COL18A1-205ENST00000423214 UTYO14607 1347 aa20.32■□□□□ 0.84
COL18A1-205ENST00000423214 MANSC4A6NHS7 340 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-205ENST00000423214 GPR25O00155 361 aa20.32■□□□□ 0.84
COL18A1-205ENST00000423214 ZBTB48P10074 688 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-205ENST00000423214 MAP3K11Q16584 847 aa20.32■□□□□ 0.84
COL18A1-205ENST00000423214 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
COL18A1-205ENST00000423214 KAZALD1Q96I82 304 aa20.32■□□□□ 0.84
COL18A1-205ENST00000423214 TTF2Q9UNY4 1162 aaKnown RBP20.32■□□□□ 0.84
COL18A1-205ENST00000423214 E9PSI1 815 aa20.31■□□□□ 0.84
COL18A1-205ENST00000423214 ALDH1A1P00352 501 aa20.31■□□□□ 0.84
COL18A1-205ENST00000423214 IREB2P48200 963 aaKnown RBP20.31■□□□□ 0.84
COL18A1-205ENST00000423214 NOM1Q5C9Z4 860 aaKnown RBP20.31■□□□□ 0.84
COL18A1-205ENST00000423214 METTL24Q5JXM2 366 aa20.31■□□□□ 0.84
COL18A1-205ENST00000423214 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
COL18A1-205ENST00000423214 CLMNQ96JQ2 1002 aa20.31■□□□□ 0.84
COL18A1-205ENST00000423214 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
COL18A1-205ENST00000423214 FRAT2O75474 233 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-205ENST00000423214 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-205ENST00000423214 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-205ENST00000423214 WNK4Q96J92 1243 aa20.3■□□□□ 0.84
COL18A1-205ENST00000423214 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-205ENST00000423214 HPS5Q9UPZ3 1129 aa20.3■□□□□ 0.84
COL18A1-205ENST00000423214 AOX1Q06278 1338 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 UNCXA6NJT0 531 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 FKTNO75072 461 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 RASA3Q14644 834 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 CFHR5Q9BXR6 569 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
COL18A1-205ENST00000423214 INHBEP58166 350 aa20.28■□□□□ 0.84
COL18A1-205ENST00000423214 CHAF1AQ13111 956 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-205ENST00000423214 ANKRD44Q8N8A2 993 aa20.28■□□□□ 0.84
COL18A1-205ENST00000423214 TDRD3Q9H7E2 651 aaKnown RBP20.28■□□□□ 0.84
COL18A1-205ENST00000423214 ZNF70Q9UC06 446 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-205ENST00000423214 IQSEC3Q9UPP2 1182 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-205ENST00000423214 TNNI2P48788 182 aa20.27■□□□□ 0.84
COL18A1-205ENST00000423214 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
COL18A1-205ENST00000423214 IFNL1Q8IU54 200 aa20.27■□□□□ 0.84
COL18A1-205ENST00000423214 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms