RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 IL1R1P14778 569 aa21.46■■□□□ 1.03
UPF3AP3-201ENST00000420996 FKBP1AP62942 108 aaKnown RBP21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 MAP3K11Q16584 847 aa21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 ZNF804AQ7Z570 1209 aa21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 WDR63Q8IWG1 891 aa21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 SLC10A4Q96EP9 437 aa21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 PPP2R3BQ9Y5P8 575 aa21.45■■□□□ 1.02
UPF3AP3-201ENST00000420996 PPP1R12BO60237 982 aaPredicted RBP21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 FKTNO75072 461 aa21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 ALDH1A1P00352 501 aa21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 INHBEP58166 350 aa21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 BEND3Q5T5X7 828 aa21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 FBXO46Q6PJ61 603 aaPredicted RBP21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 CHMP3Q9Y3E7 222 aa21.44■■□□□ 1.02
UPF3AP3-201ENST00000420996 F6X3S4 739 aa21.43■■□□□ 1.02
UPF3AP3-201ENST00000420996 MYO1BO43795 1136 aa21.43■■□□□ 1.02
UPF3AP3-201ENST00000420996 LMBR1LQ6UX01 489 aa21.43■■□□□ 1.02
UPF3AP3-201ENST00000420996 R3HDMLQ9H3Y0 253 aa21.43■■□□□ 1.02
UPF3AP3-201ENST00000420996 FZD1Q9UP38 647 aa21.43■■□□□ 1.02
UPF3AP3-201ENST00000420996 MANSC4A6NHS7 340 aaPredicted RBP21.42■■□□□ 1.02
UPF3AP3-201ENST00000420996 UNCXA6NJT0 531 aa21.42■■□□□ 1.02
UPF3AP3-201ENST00000420996 LAMB1P07942 1786 aa21.42■■□□□ 1.02
UPF3AP3-201ENST00000420996 CFAP100Q494V2 611 aa21.42■■□□□ 1.02
UPF3AP3-201ENST00000420996 PCDHAC2Q9Y5I4 1007 aa21.42■■□□□ 1.02
UPF3AP3-201ENST00000420996 SPDYE2BA6NHP3 402 aa21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 F8W031 263 aaPredicted RBP21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 SPDYE6P0CI01 402 aa21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 ZBTB48P10074 688 aaPredicted RBP21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 CCDC57Q2TAC2 916 aa21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 SUPT20HL1Q3ZLR7 823 aa21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 LDHAL6AQ6ZMR3 332 aa21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 PRMT6Q96LA8 375 aaPredicted RBP21.41■■□□□ 1.02
UPF3AP3-201ENST00000420996 SSC5DA1L4H1 1573 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 CLRN2A0PK11 232 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 EPHA10Q5JZY3 1008 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 IFNL1Q8IU54 200 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 WNK4Q96J92 1243 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 CLMNQ96JQ2 1002 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
UPF3AP3-201ENST00000420996 GRM8O00222 908 aa21.39■■□□□ 1.01
UPF3AP3-201ENST00000420996 PLIN1O60240 522 aa21.39■■□□□ 1.01
UPF3AP3-201ENST00000420996 TAF7LQ5H9L4 462 aa21.39■■□□□ 1.01
UPF3AP3-201ENST00000420996 PRPF38BQ5VTL8 546 aaKnown RBP21.39■■□□□ 1.01
UPF3AP3-201ENST00000420996 ZNF594Q96JF6 807 aaPredicted RBP21.39■■□□□ 1.01
UPF3AP3-201ENST00000420996 VEZTQ9HBM0 779 aa21.38■■□□□ 1.01
UPF3AP3-201ENST00000420996 CNNM1Q9NRU3 951 aa21.38■■□□□ 1.01
UPF3AP3-201ENST00000420996 FAM205AQ6ZU69 1335 aa21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 IREB2P48200 963 aaKnown RBP21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 NBPF12Q5TAG4 269 aaPredicted RBP21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 PCDH10Q9P2E7 1040 aa21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 JAG2Q9Y219 1238 aa21.37■■□□□ 1.01
UPF3AP3-201ENST00000420996 AOX1Q06278 1338 aa21.36■■□□□ 1.01
UPF3AP3-201ENST00000420996 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
UPF3AP3-201ENST00000420996 UBE4AQ14139 1066 aa21.36■■□□□ 1.01
UPF3AP3-201ENST00000420996 RASA3Q14644 834 aa21.36■■□□□ 1.01
UPF3AP3-201ENST00000420996 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
UPF3AP3-201ENST00000420996 IGF2BP3O00425 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
UPF3AP3-201ENST00000420996 USP2O75604 605 aaPredicted RBP21.35■■□□□ 1.01
UPF3AP3-201ENST00000420996 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
UPF3AP3-201ENST00000420996 TNFAIP1Q13829 316 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 MFSD14BQ5SR56 506 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 OTUD7BQ6GQQ9 843 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 ANKRD13AQ8IZ07 590 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 SERPINA10Q9UK55 444 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 TRIM17Q9Y577 477 aa21.34■■□□□ 1.01
UPF3AP3-201ENST00000420996 HIBADHP31937 336 aaKnown RBP21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 GJA5P36382 358 aa21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 SPDYE2Q495Y8 402 aa21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 OTOP1Q7RTM1 612 aa21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 FAM84BQ96KN1 310 aaPredicted RBP21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 SRCIN1Q9C0H9 1055 aa21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 ZNF70Q9UC06 446 aaPredicted RBP21.33■■□□□ 1.01
UPF3AP3-201ENST00000420996 GYG1P46976 350 aa21.32■■□□□ 1
UPF3AP3-201ENST00000420996 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
UPF3AP3-201ENST00000420996 TTF2Q9UNY4 1162 aaKnown RBP21.32■■□□□ 1
UPF3AP3-201ENST00000420996 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
UPF3AP3-201ENST00000420996 OTOFQ9HC10 1997 aa21.31■■□□□ 1
UPF3AP3-201ENST00000420996 TESPA1A2RU30 521 aaPredicted RBP21.31■■□□□ 1
UPF3AP3-201ENST00000420996 ERO1AQ96HE7 468 aa21.31■■□□□ 1
UPF3AP3-201ENST00000420996 TDRD3Q9H7E2 651 aaKnown RBP21.31■■□□□ 1
UPF3AP3-201ENST00000420996 ANP32CO43423 234 aa21.3■■□□□ 1
UPF3AP3-201ENST00000420996 CRHR2Q13324 411 aa21.3■■□□□ 1
UPF3AP3-201ENST00000420996 INTS3Q68E01 1043 aaKnown RBP21.3■■□□□ 1
UPF3AP3-201ENST00000420996 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
UPF3AP3-201ENST00000420996 KAZALD1Q96I82 304 aa21.3■■□□□ 1
UPF3AP3-201ENST00000420996 SUCLG2Q96I99 432 aa21.3■■□□□ 1
UPF3AP3-201ENST00000420996 PUS3Q9BZE2 481 aaKnown RBP21.3■■□□□ 1
UPF3AP3-201ENST00000420996 RIPOR2Q9Y4F9 1068 aa21.3■■□□□ 1
UPF3AP3-201ENST00000420996 TEPSINQ96N21 525 aa21.29■■□□□ 1
UPF3AP3-201ENST00000420996 PTPN18Q99952 460 aa21.29■■□□□ 1
UPF3AP3-201ENST00000420996 MROH5Q6ZUA9 1318 aa21.29■■□□□ 1
UPF3AP3-201ENST00000420996 CRKP46108 304 aa21.28■■□□□ 1
UPF3AP3-201ENST00000420996 OPTNQ96CV9 577 aa21.28■■□□□ 1
UPF3AP3-201ENST00000420996 ELP3Q9H9T3 547 aa21.28■■□□□ 1
UPF3AP3-201ENST00000420996 UTYO14607 1347 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms