RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GSTT1P30711 240 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 SPRED3Q2MJR0 410 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 BCL11AQ9H165 835 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 ZNF576Q9H609 170 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 SH2B1Q9NRF2 756 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 FAM177BA6PVY3 158 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 SORBS3O60504 671 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 EPHA1P21709 976 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 VAMP1P23763 118 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 CABP4P57796 275 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 MRPL58Q14197 206 aaKnown RBP6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 PPM1HQ9ULR3 514 aa6.57□□□□□ -1.36
HMGB1P11-201ENST00000413899 TM4SF5O14894 197 aa6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 PIP4K2BP78356 416 aa6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 DTHD1Q6ZMT9 781 aa6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 ALYREFQ86V81 257 aaKnown RBP6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 DCAF11Q8TEB1 546 aa6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 CLEC4MQ9H2X3 399 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 SOX17Q9H6I2 414 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P11-201ENST00000413899 A0A0A0MRY4 1105 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 EIF4EBP3O60516 100 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 DEAF1O75398 565 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 B3GALT4O96024 378 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 USP17L7P0C7H9 530 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 ESRRAP11474 423 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 FCGRTP55899 365 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 RAC1P63000 192 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 PCDH1Q08174 1060 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 IKBKEQ14164 716 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 SETDB1Q15047 1291 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 TRAPPC3LQ5T215 181 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 FAM117BQ6P1L5 589 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 FBXO11Q86XK2 927 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 FMR1NBQ8N0W7 255 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 FAM161BQ96MY7 647 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
HMGB1P11-201ENST00000413899 UNCXA6NJT0 531 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 LINC01387J3KSC0 135 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 RNF225M0QZC1 329 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 FSCN2O14926 492 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 KLHL23Q8NBE8 558 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 CRELD1Q96HD1 420 aa6.54□□□□□ -1.36
HMGB1P11-201ENST00000413899 DLL1O00548 723 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 CTSHP09668 335 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 ELNP15502 786 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 COL8A1P27658 744 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 C19orf57Q0VDD7 668 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 FAAP100Q0VG06 881 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 TRIM28Q13263 835 aaKnown RBP6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 PRRT3Q5FWE3 981 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 SEC31BQ9NQW1 1179 aa6.53□□□□□ -1.36
HMGB1P11-201ENST00000413899 SPATA31C1P0DKV0 1188 aa6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 ST13P50502 369 aaKnown RBP6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 KIAA1522Q9P206 1035 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 VTI1BQ9UEU0 232 aa6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 AKAP2Q9Y2D5 859 aa6.52□□□□□ -1.37
HMGB1P11-201ENST00000413899 ARL4DP49703 201 aa6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 KCNMA1Q12791 1236 aa6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 SUZ12Q15022 739 aaKnown RBP6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 LDLRAD1Q5T700 205 aa6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 GALNT11Q8NCW6 608 aa6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 MRRFQ96E11 262 aaKnown RBP6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
HMGB1P11-201ENST00000413899 CDC25BP30305 580 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 CD68P34810 354 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 HGSNATQ68CP4 663 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 SV2BQ7L1I2 683 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 KLHDC7BQ96G42 594 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 CARD10Q9BWT7 1032 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 TMEM39AQ9NV64 488 aa6.5□□□□□ -1.37
HMGB1P11-201ENST00000413899 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 RECKO95980 971 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 GSK3AP49840 483 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 PPP2R3AQ06190 1150 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 AP3B2Q13367 1082 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 FOXD4L6Q3SYB3 417 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 IGF2-ASQ6U949 168 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 FOXD4L3Q6VB84 417 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 ZNF428Q96B54 188 aa6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 NOC4LQ9BVI4 516 aaKnown RBP6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
HMGB1P11-201ENST00000413899 ENC1O14682 589 aa6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 ADAM11O75078 769 aa6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 LENG1Q96BZ8 264 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P11-201ENST00000413899 TRIM56Q9BRZ2 755 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms