RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 DDX58O95786 925 aaKnown RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 COL1A1P02452 1464 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 SPDYE6P0CI01 402 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CETPP11597 493 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CAPN2P17655 700 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 GRK4P32298 578 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 IGHMBP2P38935 993 aaKnown RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 KCNJ4P48050 445 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 RBM5P52756 815 aaKnown RBP eCLIP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CTSWP56202 376 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 UBXN2AP68543 259 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 MAP3K9P80192 1104 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 LACTBP83111 547 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 RASA3Q14644 834 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 MTFR1Q15390 333 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 KRT24Q2M2I5 525 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CFAP100Q494V2 611 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 NBPF12Q5TAG4 269 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 GPR153Q6NV75 609 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 UBE2Q1Q7Z7E8 422 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 TXNRD3Q86VQ6 643 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 FAM43AQ8N2R8 423 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 DEFB123Q8N688 67 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 TTLL11Q8NHH1 800 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 RAET1EQ8TD07 263 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 SHISA4Q96DD7 197 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 TRIM47Q96LD4 638 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 MYD88Q99836 296 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CHMP4AQ9BY43 222 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 RNF208Q9H0X6 261 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 VEZTQ9HBM0 779 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CD209Q9NNX6 404 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZCCHC17Q9NP64 241 aaKnown RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CWC25Q9NXE8 425 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 BIN2Q9UBW5 565 aaPredicted RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 SRRDQ9UH36 339 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 STXBP5LQ9Y2K9 1186 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 LAS1LQ9Y4W2 734 aaKnown RBP3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 CSADQ9Y600 493 aa3.06□□□□□ -1.92
RNU4-53P-201ENST00000410828 LAMA3Q16787 3333 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 CENPFP49454 3210 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 SPDYE5A6NIY4 337 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 BTBD19C9JJ37 291 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 F8W031 263 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 SOX1O00570 391 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 FARP2O94887 1054 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 FMNL1O95466 1100 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCL5P13501 91 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 OSBPP22059 807 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 KLRK1P26718 216 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 TMPOP42166 694 aaKnown RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 PSMC4P43686 418 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 TNNI2P48788 182 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 FKBP1AP62942 108 aaKnown RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 NEXNQ0ZGT2 675 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 SNAPC2Q13487 334 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 NEUROD2Q15784 382 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 DUSP27Q5VZP5 1158 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 C17orf99Q6UX52 265 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 ERO1BQ86YB8 467 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 CERS5Q8N5B7 392 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCER1Q8TC90 406 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 U2AF1L4Q8WU68 220 aaKnown RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 JARID2Q92833 1246 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 LRCH3Q96II8 777 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 PRMT6Q96LA8 375 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 MPHOSPH8Q99549 860 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 METTL22Q9BUU2 404 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 COL25A1Q9BXS0 654 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 ARHGAP39Q9C0H5 1083 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 GREM2Q9H772 168 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZNF70Q9UC06 446 aaPredicted RBP3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 STAP2Q9UGK3 403 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 RIPOR2Q9Y4F9 1068 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 PCDHAC2Q9Y5I4 1007 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 SZT2Q5T011 3432 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 SCN9AQ15858 1988 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 LRRC37AA6NMS7 1700 aa3.05□□□□□ -1.92
RNU4-53P-201ENST00000410828 PIEZO1Q92508 2521 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 MYPNQ86TC9 1320 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ELL2O00472 640 aaPredicted RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 IRF6O14896 467 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ECM2O94769 699 aaPredicted RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 SGPL1O95470 568 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 TFRCP02786 760 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 IL1R1P14778 569 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ITGA6P23229 1130 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 BMP8BP34820 402 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 FCGRTP55899 365 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 PPATQ06203 517 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 CHRNDQ07001 517 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 VGLL4Q14135 290 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 LRIT3Q3SXY7 679 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 SPDYE2Q495Y8 402 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 KSR2Q6VAB6 950 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 C15orf52Q6ZUT6 534 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZNF804AQ7Z570 1209 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms