RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PHKA1P46020 1223 aa27.62■■■□□ 2.01
PTCD3-203ENST00000409783 HIRAP54198 1017 aaPredicted RBP27.62■■■□□ 2.01
PTCD3-203ENST00000409783 FKBP1AP62942 108 aaKnown RBP27.62■■■□□ 2.01
PTCD3-203ENST00000409783 TRPM4Q8TD43 1214 aa27.62■■■□□ 2.01
PTCD3-203ENST00000409783 XAGE2Q96GT9 111 aa27.62■■■□□ 2.01
PTCD3-203ENST00000409783 COL1A1P02452 1464 aaPredicted RBP27.62■■■□□ 2.01
PTCD3-203ENST00000409783 H7C1D1 291 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 EGFRP00533 1210 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 C1QTNF8P60827 252 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 EAPPQ56P03 285 aaPredicted RBP27.61■■■□□ 2.01
PTCD3-203ENST00000409783 TNNI3KQ59H18 835 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 LDHDQ86WU2 507 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 FPGT-TNNI3KV9GXZ4 949 aa27.61■■■□□ 2.01
PTCD3-203ENST00000409783 USP17L8P0C7I0 530 aa27.6■■■□□ 2.01
PTCD3-203ENST00000409783 HSP90AB4PQ58FF6 505 aa27.6■■■□□ 2.01
PTCD3-203ENST00000409783 CCDC102BQ68D86 513 aa27.6■■■□□ 2.01
PTCD3-203ENST00000409783 SAMD7Q7Z3H4 446 aa27.6■■■□□ 2.01
PTCD3-203ENST00000409783 ERC1Q8IUD2 1116 aa27.59■■■□□ 2.01
PTCD3-203ENST00000409783 SMC1BQ8NDV3 1235 aa27.59■■■□□ 2.01
PTCD3-203ENST00000409783 NEUROD6Q96NK8 337 aa27.59■■■□□ 2.01
PTCD3-203ENST00000409783 CHADLQ6NUI6 762 aa27.58■■■□□ 2.01
PTCD3-203ENST00000409783 RHPN1Q8TCX5 695 aa27.58■■■□□ 2.01
PTCD3-203ENST00000409783 FSTL1Q12841 308 aa27.57■■■□□ 2
PTCD3-203ENST00000409783 TBC1D10BQ4KMP7 808 aaPredicted RBP27.57■■■□□ 2
PTCD3-203ENST00000409783 MFSD14BQ5SR56 506 aa27.57■■■□□ 2
PTCD3-203ENST00000409783 KIAA0825Q8IV33 1275 aa27.57■■■□□ 2
PTCD3-203ENST00000409783 EXOC6Q8TAG9 804 aa27.57■■■□□ 2
PTCD3-203ENST00000409783 EAF2Q96CJ1 260 aaPredicted RBP27.57■■■□□ 2
PTCD3-203ENST00000409783 PGAP2Q9UHJ9 254 aa27.57■■■□□ 2
PTCD3-203ENST00000409783 CHAF1AQ13111 956 aaPredicted RBP27.56■■■□□ 2
PTCD3-203ENST00000409783 RAB11FIP3O75154 756 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 FRAT2O75474 233 aaPredicted RBP27.55■■■□□ 2
PTCD3-203ENST00000409783 AAMPQ13685 434 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 GRIK5Q16478 980 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 DBNDD2Q9BQY9 259 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 DCTPP1Q9H773 170 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 MYOZ2Q9NPC6 264 aa27.55■■■□□ 2
PTCD3-203ENST00000409783 GNL3LQ9NVN8 582 aaKnown RBP27.55■■■□□ 2
PTCD3-203ENST00000409783 SEMA3EO15041 775 aa27.54■■■□□ 2
PTCD3-203ENST00000409783 MMP14P50281 582 aa27.54■■■□□ 2
PTCD3-203ENST00000409783 KIF4BQ2VIQ3 1234 aa27.54■■■□□ 2
PTCD3-203ENST00000409783 RBM26Q5T8P6 1007 aaKnown RBP27.54■■■□□ 2
PTCD3-203ENST00000409783 KIF1BPQ96EK5 621 aa27.54■■■□□ 2
PTCD3-203ENST00000409783 TLR7Q9NYK1 1049 aaKnown RBP27.54■■■□□ 2
PTCD3-203ENST00000409783 DBNLQ9UJU6 430 aaKnown RBP27.54■■■□□ 2
PTCD3-203ENST00000409783 CLEC11AQ9Y240 323 aa27.54■■■□□ 2
PTCD3-203ENST00000409783 RASGRF1Q13972 1273 aa27.53■■■□□ 2
PTCD3-203ENST00000409783 TBC1D22AQ8WUA7 517 aa27.53■■■□□ 2
PTCD3-203ENST00000409783 IL1RAPL2Q9NP60 686 aa27.53■■■□□ 2
PTCD3-203ENST00000409783 POLR2AP24928 1970 aaKnown RBP27.53■■■□□ 2
PTCD3-203ENST00000409783 AKAP11Q9UKA4 1901 aa27.53■■■□□ 2
PTCD3-203ENST00000409783 APBB1O00213 710 aa27.52■■■□□ 2
PTCD3-203ENST00000409783 ARID4AP29374 1257 aaPredicted RBP27.52■■■□□ 2
PTCD3-203ENST00000409783 MAP1SQ66K74 1059 aaPredicted RBP27.52■■■□□ 2
PTCD3-203ENST00000409783 OGFOD1Q8N543 542 aa27.52■■■□□ 2
PTCD3-203ENST00000409783 ZC3H15Q8WU90 426 aaKnown RBP27.52■■■□□ 2
PTCD3-203ENST00000409783 ZBED3Q96IU2 234 aaPredicted RBP27.52■■■□□ 2
PTCD3-203ENST00000409783 CCDC8Q9H0W5 538 aaPredicted RBP27.52■■■□□ 2
PTCD3-203ENST00000409783 DENND2AQ9ULE3 1009 aa27.52■■■□□ 2
PTCD3-203ENST00000409783 PDS5AQ29RF7 1337 aaKnown RBP27.51■■□□□ 1.99
PTCD3-203ENST00000409783 F8W031 263 aaPredicted RBP27.51■■□□□ 1.99
PTCD3-203ENST00000409783 ITGBL1O95965 494 aaPredicted RBP27.51■■□□□ 1.99
PTCD3-203ENST00000409783 WDR66Q8TBY9 1149 aa27.51■■□□□ 1.99
PTCD3-203ENST00000409783 ASTN2O75129 1339 aaPredicted RBP27.5■■□□□ 1.99
PTCD3-203ENST00000409783 GORABQ5T7V8 394 aa27.5■■□□□ 1.99
PTCD3-203ENST00000409783 HDAC9Q9UKV0 1011 aa27.5■■□□□ 1.99
PTCD3-203ENST00000409783 SALL1Q9NSC2 1324 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 IRX6P78412 446 aaPredicted RBP27.49■■□□□ 1.99
PTCD3-203ENST00000409783 SCARF1Q14162 830 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 AACSQ86V21 672 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 CNTROBQ8N137 903 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 MTMR14Q8NCE2 650 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 HMG20BQ9P0W2 317 aa27.49■■□□□ 1.99
PTCD3-203ENST00000409783 WNT10BO00744 389 aa27.48■■□□□ 1.99
PTCD3-203ENST00000409783 NBPF9Q3BBW0 867 aa27.48■■□□□ 1.99
PTCD3-203ENST00000409783 ZNF512BQ96KM6 892 aaPredicted RBP27.48■■□□□ 1.99
PTCD3-203ENST00000409783 TTF2Q9UNY4 1162 aaKnown RBP27.48■■□□□ 1.99
PTCD3-203ENST00000409783 SUGT1Q9Y2Z0 365 aa27.48■■□□□ 1.99
PTCD3-203ENST00000409783 PCDHAC2Q9Y5I4 1007 aa27.48■■□□□ 1.99
PTCD3-203ENST00000409783 PASKQ96RG2 1323 aa27.47■■□□□ 1.99
PTCD3-203ENST00000409783 UQCRFS1P1P0C7P4 283 aa27.47■■□□□ 1.99
PTCD3-203ENST00000409783 MCAMP43121 646 aa27.47■■□□□ 1.99
PTCD3-203ENST00000409783 HDAC1Q13547 482 aaPredicted RBP27.47■■□□□ 1.99
PTCD3-203ENST00000409783 PI16Q6UXB8 463 aa27.47■■□□□ 1.99
PTCD3-203ENST00000409783 CLASRPQ8N2M8 674 aaKnown RBP27.47■■□□□ 1.99
PTCD3-203ENST00000409783 ECM29Q5VYK3 1845 aa27.46■■□□□ 1.99
PTCD3-203ENST00000409783 CCDC158Q5M9N0 1113 aa27.46■■□□□ 1.99
PTCD3-203ENST00000409783 LRRCC1Q9C099 1032 aa27.46■■□□□ 1.99
PTCD3-203ENST00000409783 SPATA5Q8NB90 893 aa27.45■■□□□ 1.98
PTCD3-203ENST00000409783 SMARCA5O60264 1052 aaPredicted RBP27.44■■□□□ 1.98
PTCD3-203ENST00000409783 PRDX5P30044 214 aa27.44■■□□□ 1.98
PTCD3-203ENST00000409783 CFAP100Q494V2 611 aa27.44■■□□□ 1.98
PTCD3-203ENST00000409783 TTC39AQ5SRH9 613 aa27.44■■□□□ 1.98
PTCD3-203ENST00000409783 GGA3Q9NZ52 723 aa27.44■■□□□ 1.98
PTCD3-203ENST00000409783 SERPINA10Q9UK55 444 aa27.44■■□□□ 1.98
PTCD3-203ENST00000409783 AOX1Q06278 1338 aa27.43■■□□□ 1.98
PTCD3-203ENST00000409783 HDLBPQ00341 1268 aaKnown RBP27.43■■□□□ 1.98
PTCD3-203ENST00000409783 DLGAP5Q15398 846 aa27.43■■□□□ 1.98
PTCD3-203ENST00000409783 MRIQ9BWK5 157 aa27.43■■□□□ 1.98
PTCD3-203ENST00000409783 GLIS2Q9BZE0 524 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms