RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 VGLL2Q8N8G2 317 aa24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 TDRD7Q8NHU6 1098 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 FAM84BQ96KN1 310 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 IPO8O15397 1037 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-209ENST00000409543 GYG1P46976 350 aa24.55■■□□□ 1.52
TSPAN4-209ENST00000409543 INTS3Q68E01 1043 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-209ENST00000409543 ZBED3Q96IU2 234 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-209ENST00000409543 FAM205AQ6ZU69 1335 aa24.55■■□□□ 1.52
TSPAN4-209ENST00000409543 CTCFP49711 727 aaPredicted RBP24.54■■□□□ 1.52
TSPAN4-209ENST00000409543 AOC2O75106 756 aa24.53■■□□□ 1.52
TSPAN4-209ENST00000409543 PTPN12Q05209 780 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-209ENST00000409543 EYA2O00167 538 aa24.52■■□□□ 1.52
TSPAN4-209ENST00000409543 DLGAP5Q15398 846 aa24.52■■□□□ 1.52
TSPAN4-209ENST00000409543 FBXO33Q7Z6M2 555 aa24.52■■□□□ 1.52
TSPAN4-209ENST00000409543 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
TSPAN4-209ENST00000409543 JAG2Q9Y219 1238 aa24.52■■□□□ 1.52
TSPAN4-209ENST00000409543 BCAR3O75815 825 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 FKBP1BP68106 108 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 CAVIN4Q5BKX8 364 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 RGMBQ6NW40 437 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 VPS37DQ86XT2 251 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 MEIS3Q99687 375 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 FBXO3Q9UK99 471 aa24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 SCAF8Q9UPN6 1271 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 LRRFIP2Q9Y608 721 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-209ENST00000409543 PUM3Q15397 648 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-209ENST00000409543 ATF7IPQ6VMQ6 1270 aa24.5■■□□□ 1.51
TSPAN4-209ENST00000409543 APOBEC3FQ8IUX4 373 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-209ENST00000409543 BEGAINQ9BUH8 593 aa24.5■■□□□ 1.51
TSPAN4-209ENST00000409543 PRDM10Q9NQV6 1147 aa24.5■■□□□ 1.51
TSPAN4-209ENST00000409543 F8W031 263 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 GNAI3P08754 354 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 TRIM27P14373 513 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 FGFR2P21802 821 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 NOGQ13253 232 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 MFSD14BQ5SR56 506 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 ATG9AQ7Z3C6 839 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 FRAT1Q92837 279 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 CCDC102AQ96A19 550 aa24.49■■□□□ 1.51
TSPAN4-209ENST00000409543 CIAO1O76071 339 aa24.48■■□□□ 1.51
TSPAN4-209ENST00000409543 CFAP100Q494V2 611 aa24.48■■□□□ 1.51
TSPAN4-209ENST00000409543 FAM155AB1AL88 458 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-209ENST00000409543 IFIT1P09914 478 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-209ENST00000409543 ZNF157P51786 506 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-209ENST00000409543 PRAMEF18Q5VWM3 479 aa24.47■■□□□ 1.51
TSPAN4-209ENST00000409543 TNS4Q8IZW8 715 aa24.47■■□□□ 1.51
TSPAN4-209ENST00000409543 ZBED9Q6R2W3 1325 aa24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 SPDYE2BA6NHP3 402 aa24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 SPDYE6P0CI01 402 aa24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 HSPA8P11142 646 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 LBX1P52954 281 aa24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 PAPPA2Q9BXP8 1791 aa24.46■■□□□ 1.51
TSPAN4-209ENST00000409543 MYO1BO43795 1136 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 NF2P35240 595 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 BCAMP50895 628 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 LPIN2Q92539 896 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 PRMT6Q96LA8 375 aaPredicted RBP24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 SIL1Q9H173 461 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 TTF2Q9UNY4 1162 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 IQSEC3Q9UPP2 1182 aaPredicted RBP24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 TNNQ9UQP3 1299 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 PCDHAC2Q9Y5I4 1007 aa24.45■■□□□ 1.5
TSPAN4-209ENST00000409543 FRAT2O75474 233 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 SLC5A1P13866 664 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 TBC1D22AQ8WUA7 517 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 COPRSQ9NQ92 184 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 CEP126Q9P2H0 1117 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 SERPINA10Q9UK55 444 aa24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 COL1A1P02452 1464 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-209ENST00000409543 ECM29Q5VYK3 1845 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 CA12O43570 354 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 SLC10A3P09131 477 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 IL15P40933 162 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 RBM5P52756 815 aaKnown RBP eCLIP24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 CLUAP1Q96AJ1 413 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 ZIC5Q96T25 663 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 DEFB129Q9H1M3 183 aa24.43■■□□□ 1.5
TSPAN4-209ENST00000409543 ARAP2Q8WZ64 1704 aa24.42■■□□□ 1.5
TSPAN4-209ENST00000409543 CHAF1AQ13111 956 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-209ENST00000409543 MTX1Q13505 466 aa24.42■■□□□ 1.5
TSPAN4-209ENST00000409543 MOB2Q70IA6 237 aa24.42■■□□□ 1.5
TSPAN4-209ENST00000409543 PA2G4Q9UQ80 394 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-209ENST00000409543 PPP2R3BQ9Y5P8 575 aa24.41■■□□□ 1.5
TSPAN4-209ENST00000409543 CLRN2A0PK11 232 aa24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 UBE2Q2LH0YL09 131 aa24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 SRGAP3O43295 1099 aa24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 KIF23Q02241 960 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 TTLL12Q14166 644 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 ATP2B3Q16720 1220 aa24.4■■□□□ 1.5
TSPAN4-209ENST00000409543 AOX1Q06278 1338 aa24.39■■□□□ 1.5
TSPAN4-209ENST00000409543 GNAI2P04899 355 aa24.39■■□□□ 1.49
TSPAN4-209ENST00000409543 HDLBPQ00341 1268 aaKnown RBP24.39■■□□□ 1.49
TSPAN4-209ENST00000409543 GRIK5Q16478 980 aa24.39■■□□□ 1.49
TSPAN4-209ENST00000409543 RASAL3Q86YV0 1011 aa24.39■■□□□ 1.49
TSPAN4-209ENST00000409543 CRKP46108 304 aa24.38■■□□□ 1.49
TSPAN4-209ENST00000409543 DZIP1LQ8IYY4 767 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-209ENST00000409543 TMEM57Q8N5G2 664 aa24.38■■□□□ 1.49
TSPAN4-209ENST00000409543 VEZTQ9HBM0 779 aa24.38■■□□□ 1.49
TSPAN4-209ENST00000409543 SUGT1Q9Y2Z0 365 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms