RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 SIK1P57059 783 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 USP37Q86T82 979 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 PICALMQ13492 652 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 VEZTQ9HBM0 779 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 NEMFO60524 1076 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 RAB3GAP1Q15042 981 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 BRAPQ7Z569 592 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 C16orf71Q8IYS4 520 aaPredicted RBP19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 CNKSR1Q969H4 720 aa19.25■□□□□ 0.67
PCDHA13-202ENST00000409494 ATP2B4P23634 1241 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 STX1AQ16623 288 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 ATP5JP18859 108 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 PLEKHF1Q96S99 279 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 MBD4O95243 580 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 NAPAP54920 295 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 CTSWP56202 376 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 SMARCC2Q8TAQ2 1214 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 TIMM10P62072 90 aa19.24■□□□□ 0.67
PCDHA13-202ENST00000409494 UNC5CLQ8IV45 518 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 LRSAM1Q6UWE0 723 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 RUFY3Q7L099 469 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 DBNDD2Q9BQY9 259 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 ZSCAN12O43309 604 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 CCDC181Q5TID7 509 aa19.23■□□□□ 0.67
PCDHA13-202ENST00000409494 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 SPDYE3A6NKU9 549 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 SPAG1Q07617 926 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 UVSSAQ2YD98 709 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 LARGE2Q8N3Y3 721 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 SPHKAPQ2M3C7 1700 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 RXRBP28702 533 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 SPA17Q15506 151 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 LLPHQ9BRT6 129 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 ARHGEF10LQ9HCE6 1279 aa19.22■□□□□ 0.67
PCDHA13-202ENST00000409494 ZNF335Q9H4Z2 1342 aaPredicted RBP19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 LZTS2Q9BRK4 669 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 GPR108Q9NPR9 543 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 CCDC66A2RUB6 948 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 CACNA2D4Q7Z3S7 1137 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 TAF4BQ92750 862 aa19.21■□□□□ 0.67
PCDHA13-202ENST00000409494 MIGA1Q8NAN2 632 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 HEATR3Q7Z4Q2 680 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 GSDMDP57764 484 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 TTLL5Q6EMB2 1281 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 NIM1KQ8IY84 436 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 PDCL2Q8N4E4 241 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 ARHGAP29Q52LW3 1261 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 JAKMIP3Q5VZ66 844 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 PAF1Q8N7H5 531 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 SAMM50Q9Y512 469 aa19.2■□□□□ 0.66
PCDHA13-202ENST00000409494 IDEP14735 1019 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 SYKP43405 635 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 KRI1Q8N9T8 703 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 USP26Q9BXU7 913 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 ALKQ9UM73 1620 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 SEMA3EO15041 775 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 BEND3Q5T5X7 828 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 SPATA5Q8NB90 893 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 USP44Q9H0E7 712 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 STK24Q9Y6E0 443 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 LAMC1P11047 1609 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 TOP1P11387 765 aaKnown RBP19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
PCDHA13-202ENST00000409494 ADCY5O95622 1261 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 CCDC172P0C7W6 258 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 KIAA1328Q86T90 577 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 MRPS27Q92552 414 aaKnown RBP19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 KRT2P35908 639 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 SETQ01105 290 aaPredicted RBP19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 TNFAIP1Q13829 316 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 COPRSQ9NQ92 184 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 CROCC2H7BZ55 1655 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 SGSM2O43147 1006 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 ERLIN1O75477 346 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 CKAP2LQ8IYA6 745 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 PNMA2Q9UL42 364 aa19.18■□□□□ 0.66
PCDHA13-202ENST00000409494 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 CIAO1O76071 339 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 UBE4AQ14139 1066 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 KLHL10Q6JEL2 608 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms