RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 NMRK2Q9NPI5 230 aa21.72■■□□□ 1.07
CTNS-203ENST00000399306 DENND2AQ9ULE3 1009 aa21.72■■□□□ 1.07
CTNS-203ENST00000399306 SUGT1Q9Y2Z0 365 aa21.72■■□□□ 1.07
CTNS-203ENST00000399306 KIF3CO14782 793 aa21.71■■□□□ 1.07
CTNS-203ENST00000399306 FRAT2O75474 233 aaPredicted RBP21.71■■□□□ 1.07
CTNS-203ENST00000399306 UQCRFS1P1P0C7P4 283 aa21.71■■□□□ 1.07
CTNS-203ENST00000399306 ADORA1P30542 326 aa21.71■■□□□ 1.07
CTNS-203ENST00000399306 PNMA8AQ86V59 439 aaPredicted RBP21.71■■□□□ 1.07
CTNS-203ENST00000399306 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
CTNS-203ENST00000399306 EAF2Q96CJ1 260 aaPredicted RBP21.71■■□□□ 1.07
CTNS-203ENST00000399306 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
CTNS-203ENST00000399306 H7C1D1 291 aa21.7■■□□□ 1.06
CTNS-203ENST00000399306 ARID4AP29374 1257 aaPredicted RBP21.7■■□□□ 1.06
CTNS-203ENST00000399306 PHKA1P46020 1223 aa21.7■■□□□ 1.06
CTNS-203ENST00000399306 CCDC158Q5M9N0 1113 aa21.7■■□□□ 1.06
CTNS-203ENST00000399306 GORABQ5T7V8 394 aa21.7■■□□□ 1.06
CTNS-203ENST00000399306 WDR66Q8TBY9 1149 aa21.7■■□□□ 1.06
CTNS-203ENST00000399306 ADARB2Q9NS39 739 aaKnown RBP21.7■■□□□ 1.06
CTNS-203ENST00000399306 CNOT7Q9UIV1 285 aaKnown RBP21.7■■□□□ 1.06
CTNS-203ENST00000399306 IGSF3O75054 1194 aa21.69■■□□□ 1.06
CTNS-203ENST00000399306 EPHX2P34913 555 aa21.69■■□□□ 1.06
CTNS-203ENST00000399306 ZNF280AP59817 542 aaPredicted RBP21.69■■□□□ 1.06
CTNS-203ENST00000399306 USP50Q70EL3 339 aaPredicted RBP21.69■■□□□ 1.06
CTNS-203ENST00000399306 ZBTB12Q9Y330 459 aaPredicted RBP21.69■■□□□ 1.06
CTNS-203ENST00000399306 SALL1Q9NSC2 1324 aa21.69■■□□□ 1.06
CTNS-203ENST00000399306 USP17L8P0C7I0 530 aa21.68■■□□□ 1.06
CTNS-203ENST00000399306 DBNLQ9UJU6 430 aaKnown RBP21.68■■□□□ 1.06
CTNS-203ENST00000399306 EPS15P42566 896 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 MFSD14BQ5SR56 506 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 AACSQ86V21 672 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 MICALL2Q8IY33 904 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 OGFOD1Q8N543 542 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 ZGPATQ8N5A5 531 aaKnown RBP21.67■■□□□ 1.06
CTNS-203ENST00000399306 DBNDD2Q9BQY9 259 aa21.67■■□□□ 1.06
CTNS-203ENST00000399306 SMC5Q8IY18 1101 aa21.66■■□□□ 1.06
CTNS-203ENST00000399306 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
CTNS-203ENST00000399306 FBXW7Q969H0 707 aa21.66■■□□□ 1.06
CTNS-203ENST00000399306 MRIQ9BWK5 157 aa21.66■■□□□ 1.06
CTNS-203ENST00000399306 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
CTNS-203ENST00000399306 HDAC9Q9UKV0 1011 aa21.66■■□□□ 1.06
CTNS-203ENST00000399306 AKAP11Q9UKA4 1901 aa21.65■■□□□ 1.06
CTNS-203ENST00000399306 TOMM70O94826 608 aa21.65■■□□□ 1.06
CTNS-203ENST00000399306 IFIT2P09913 472 aaKnown RBP21.65■■□□□ 1.06
CTNS-203ENST00000399306 IRX6P78412 446 aaPredicted RBP21.65■■□□□ 1.06
CTNS-203ENST00000399306 RASGRF1Q13972 1273 aa21.65■■□□□ 1.06
CTNS-203ENST00000399306 CERS5Q8N5B7 392 aa21.65■■□□□ 1.06
CTNS-203ENST00000399306 ZC3H15Q8WU90 426 aaKnown RBP21.65■■□□□ 1.06
CTNS-203ENST00000399306 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.65■■□□□ 1.06
CTNS-203ENST00000399306 CCDC8Q9H0W5 538 aaPredicted RBP21.65■■□□□ 1.06
CTNS-203ENST00000399306 IQSEC3Q9UPP2 1182 aaPredicted RBP21.65■■□□□ 1.06
CTNS-203ENST00000399306 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
CTNS-203ENST00000399306 COL1A1P02452 1464 aaPredicted RBP21.64■■□□□ 1.06
CTNS-203ENST00000399306 MAST3O60307 1309 aa21.64■■□□□ 1.05
CTNS-203ENST00000399306 APBB1O00213 710 aa21.64■■□□□ 1.05
CTNS-203ENST00000399306 HDLBPQ00341 1268 aaKnown RBP21.64■■□□□ 1.05
CTNS-203ENST00000399306 TTC39AQ5SRH9 613 aa21.64■■□□□ 1.05
CTNS-203ENST00000399306 MTMR14Q8NCE2 650 aa21.64■■□□□ 1.05
CTNS-203ENST00000399306 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.05
CTNS-203ENST00000399306 CHAF1AQ13111 956 aaPredicted RBP21.63■■□□□ 1.05
CTNS-203ENST00000399306 LDHDQ86WU2 507 aa21.63■■□□□ 1.05
CTNS-203ENST00000399306 SPATA5Q8NB90 893 aa21.63■■□□□ 1.05
CTNS-203ENST00000399306 PGAP2Q9UHJ9 254 aa21.63■■□□□ 1.05
CTNS-203ENST00000399306 NEFLP07196 543 aa21.62■■□□□ 1.05
CTNS-203ENST00000399306 SPTY2D1Q68D10 685 aaPredicted RBP21.62■■□□□ 1.05
CTNS-203ENST00000399306 MXD3Q9BW11 206 aa21.62■■□□□ 1.05
CTNS-203ENST00000399306 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
CTNS-203ENST00000399306 TLR7Q9NYK1 1049 aaKnown RBP21.62■■□□□ 1.05
CTNS-203ENST00000399306 HMG20BQ9P0W2 317 aa21.62■■□□□ 1.05
CTNS-203ENST00000399306 ZBTB47Q9UFB7 747 aaPredicted RBP21.62■■□□□ 1.05
CTNS-203ENST00000399306 SERPINA10Q9UK55 444 aa21.62■■□□□ 1.05
CTNS-203ENST00000399306 MCAMP43121 646 aa21.61■■□□□ 1.05
CTNS-203ENST00000399306 ERICH6BQ5W0A0 696 aa21.61■■□□□ 1.05
CTNS-203ENST00000399306 TMED8Q6PL24 325 aaPredicted RBP21.61■■□□□ 1.05
CTNS-203ENST00000399306 KIAA0825Q8IV33 1275 aa21.61■■□□□ 1.05
CTNS-203ENST00000399306 IGHDP01880 384 aa21.6■■□□□ 1.05
CTNS-203ENST00000399306 FSTL1Q12841 308 aa21.6■■□□□ 1.05
CTNS-203ENST00000399306 KIF4BQ2VIQ3 1234 aa21.6■■□□□ 1.05
CTNS-203ENST00000399306 ATP5JP18859 108 aa21.59■■□□□ 1.05
CTNS-203ENST00000399306 SMC1BQ8NDV3 1235 aa21.59■■□□□ 1.05
CTNS-203ENST00000399306 GPATCH3Q96I76 525 aa21.59■■□□□ 1.05
CTNS-203ENST00000399306 ZBED3Q96IU2 234 aaPredicted RBP21.59■■□□□ 1.05
CTNS-203ENST00000399306 TTF2Q9UNY4 1162 aaKnown RBP21.59■■□□□ 1.05
CTNS-203ENST00000399306 JAG2Q9Y219 1238 aa21.59■■□□□ 1.05
CTNS-203ENST00000399306 SMARCA5O60264 1052 aaPredicted RBP21.58■■□□□ 1.05
CTNS-203ENST00000399306 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.05
CTNS-203ENST00000399306 SCARF1Q14162 830 aa21.58■■□□□ 1.05
CTNS-203ENST00000399306 ANKRD45Q5TZF3 282 aa21.58■■□□□ 1.05
CTNS-203ENST00000399306 CHADLQ6NUI6 762 aa21.58■■□□□ 1.05
CTNS-203ENST00000399306 TRPM4Q8TD43 1214 aa21.58■■□□□ 1.05
CTNS-203ENST00000399306 PITPNM2Q9BZ72 1349 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 SHTN1A0MZ66 631 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
CTNS-203ENST00000399306 TBC1D10BQ4KMP7 808 aaPredicted RBP21.57■■□□□ 1.04
CTNS-203ENST00000399306 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
CTNS-203ENST00000399306 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 SAMD7Q7Z3H4 446 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 SLF2Q8IX21 1173 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 ECM29Q5VYK3 1845 aa21.57■■□□□ 1.04
CTNS-203ENST00000399306 TTC41PQ6P2S7 1318 aa21.56■■□□□ 1.04
CTNS-203ENST00000399306 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms