RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 RBL2Q08999 1139 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 RSPO4Q2I0M5 234 aaPredicted RBP4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 NKAPLQ5M9Q1 402 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 COL13A1Q5TAT6 717 aaPredicted RBP4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 TMC7Q7Z402 723 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 TXNRD3Q86VQ6 643 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 IL22RA1Q8N6P7 574 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 NUDT16Q96DE0 195 aaKnown RBP4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 ZSWIM4Q9H7M6 989 aa4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 ABI2Q9NYB9 513 aaPredicted RBP4.53□□□□□ -1.68
RPS4XP3-201ENST00000398541 TREHO43280 583 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 PRPF40AO75400 957 aaKnown RBP4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 ITGB7P26010 798 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 ZNF76P36508 570 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 XPCQ01831 940 aaPredicted RBP4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 HYAL2Q12891 473 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 TCEAL1Q15170 157 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 SOGA3Q5TF21 947 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 PDE12Q6L8Q7 609 aaKnown RBP4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 ZNF746Q6NUN9 644 aaPredicted RBP4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 IGF2-ASQ6U949 168 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 TMC4Q7Z404 712 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 TICAM2Q86XR7 235 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 PMFBP1Q8TBY8 1022 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 EDEM1Q92611 657 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 ACBD3Q9H3P7 528 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 MYH16Q9H6N6 1097 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 ELP3Q9H9T3 547 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 MRS2Q9HD23 443 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 TRIM33Q9UPN9 1127 aa4.52□□□□□ -1.69
RPS4XP3-201ENST00000398541 DLL1O00548 723 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 TPD52L2O43399 206 aaKnown RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 CYP2E1P05181 493 aaPredicted RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 RPLP1P05386 114 aaKnown RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 PCSK2P16519 638 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 IBSPP21815 317 aaPredicted RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 MPSTP25325 297 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 DNAJA1P31689 397 aaKnown RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 EIF1AXP47813 144 aaKnown RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 ATP11AP98196 1134 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 DNM1Q05193 864 aaKnown RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 MTMR3Q13615 1198 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 ZNF438Q7Z4V0 828 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 JAZF1Q86VZ6 243 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 FAM161BQ96MY7 647 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 OSBPL2Q9H1P3 480 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 TMEM63CQ9P1W3 806 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 PARP2Q9UGN5 583 aa4.51□□□□□ -1.69
RPS4XP3-201ENST00000398541 DYRK3O43781 588 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 SORBS3O60504 671 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 SMNDC1O75940 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 KIF4AO95239 1232 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 LDHBP07195 334 aaKnown RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 IREB2P48200 963 aaKnown RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 TNNI2P48788 182 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 ANAPC15P60006 121 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 DAB2P98082 770 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 ARID5AQ03989 594 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 C8orf34Q49A92 452 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 GORABQ5T7V8 394 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 CEP135Q66GS9 1140 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 NCAPG2Q86XI2 1143 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 CACTIN-AS1Q8N1I8 211 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 TTC16Q8NEE8 873 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 ZCRB1Q8TBF4 217 aaKnown RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 WFDC12Q8WWY7 111 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 DUSP9Q99956 384 aaKnown RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 LACRTQ9GZZ8 138 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 MUC3BQ9H195 1237 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 RASSF4Q9H2L5 321 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 GGNBP2Q9H3C7 697 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 SLC52A1Q9NWF4 448 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 CNTN3Q9P232 1028 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 BCCIPQ9P287 314 aaKnown RBP eCLIP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 VTI1BQ9UEU0 232 aa4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
RPS4XP3-201ENST00000398541 A6NHS1 94 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 NDUFB5O43674 189 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 CLSTN1O94985 981 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 PDGFAP04085 211 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 H2AFB1P0C5Y9 115 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 H2AFB2P0C5Z0 115 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 NPR3P17342 541 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 HSD3B2P26439 372 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 MZF1P28698 734 aaPredicted RBP4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 NOS3P29474 1203 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 AAMPQ13685 434 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 SETDB1Q15047 1291 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 ALKBH2Q6NS38 261 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 TMED8Q6PL24 325 aaPredicted RBP4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 XKR5Q6UX68 686 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 MAP4K3Q8IVH8 894 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 EXOC8Q8IYI6 725 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 CEP120Q8N960 986 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 TP53INP1Q96A56 240 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 SSBP4Q9BWG4 385 aaPredicted RBP4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 PRDM16Q9HAZ2 1276 aa4.49□□□□□ -1.69
RPS4XP3-201ENST00000398541 SRA1Q9HD15 236 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms