RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
PGBD4-201ENST00000397766 MRVI1Q9Y6F6 885 aa7.06□□□□□ -1.28
PGBD4-201ENST00000397766 SYT1P21579 422 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 VWA3BQ502W6 1294 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 TPTE2Q6XPS3 522 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 SMC5Q8IY18 1101 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 MEIS3Q99687 375 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 DCTPP1Q9H773 170 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 DENND2AQ9ULE3 1009 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 ALDH3A1P30838 453 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 NOLC1Q14978 699 aaKnown RBP eCLIP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 HS2ST1Q7LGA3 356 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 RBM17Q96I25 401 aaKnown RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 SHANK2Q9UPX8 1470 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 NPATQ14207 1427 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 SLU7O95391 586 aaKnown RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 HCLS1P14317 486 aaPredicted RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 PLCD1P51178 756 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 TNNC1P63316 161 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 CCDC14Q49A88 953 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 RUFY3Q7L099 469 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 ARFGAP2Q8N6H7 521 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 AOPEPQ8N6M6 819 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 CCDC42Q96M95 316 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 ZNF219Q9P2Y4 722 aaPredicted RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 MTRF1LQ9UGC7 380 aaKnown RBP7.05□□□□□ -1.28
PGBD4-201ENST00000397766 PARP3Q9Y6F1 533 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 ABCC1P33527 1531 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 WDR7Q9Y4E6 1490 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 TTC6Q86TZ1 520 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 CNGA4Q8IV77 575 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 CEP83Q9Y592 693 aa7.05□□□□□ -1.28
PGBD4-201ENST00000397766 TNNI2P48788 182 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 DZIP3Q86Y13 1208 aaKnown RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 NECAB1Q8N987 351 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 IQUBQ8NA54 791 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 FBF1Q8TES7 1133 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 NIP7Q9Y221 180 aaKnown RBP eCLIP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 MAST3O60307 1309 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 ARHGEF12Q9NZN5 1544 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 NDC80O14777 642 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 HOXB7P09629 217 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 EIF4A2Q14240 407 aaKnown RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 CLUL1Q15846 466 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 RAB3IL1Q8TBN0 382 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 DHX58Q96C10 678 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 ELP1O95163 1332 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 ATP5DP30049 168 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 MSL1Q68DK7 614 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 SMC6Q96SB8 1091 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 NAP1L3Q99457 506 aaPredicted RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 DACT1Q9NYF0 836 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 MTUS1Q9ULD2 1270 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 RXRBP28702 533 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 PPM1FP49593 454 aaPredicted RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 RAB3GAP1Q15042 981 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 CREB3L3Q68CJ9 461 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 CEP85Q6P2H3 762 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 CFAP57Q96MR6 1250 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 LARP6Q9BRS8 491 aaKnown RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 MMRN2Q9H8L6 949 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 DNAI1Q9UI46 699 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 PARP1P09874 1014 aaKnown RBP7.04□□□□□ -1.28
PGBD4-201ENST00000397766 DDB1Q16531 1140 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 PARP10Q53GL7 1025 aa7.04□□□□□ -1.28
PGBD4-201ENST00000397766 MRPS9P82933 396 aaKnown RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 UBXN1Q04323 297 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 TYRO3Q06418 890 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 RAB11FIP4Q86YS3 637 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 TMEM87BQ96K49 555 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 CSRNP2Q9H175 543 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 PTPDC1A2A3K4 754 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 DKC1O60832 514 aaKnown RBP eCLIP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 LDHBP07195 334 aaKnown RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 CLCN1P35523 988 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 SEL1L2Q5TEA6 688 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 DTHD1Q6ZMT9 781 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 CCDC186Q7Z3E2 898 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 CCDC65Q8IXS2 484 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 KIFAP3Q92845 792 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 KIF21AQ7Z4S6 1674 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 IRS4O14654 1257 aaPredicted RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 VAV2P52735 878 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 SNX16P57768 344 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 PICALMQ13492 652 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 PPP2R5BQ15173 497 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 TFCP2L1Q9NZI6 479 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 MTHFSDQ2M296 383 aaKnown RBP7.03□□□□□ -1.28
PGBD4-201ENST00000397766 RILPL1Q5EBL4 403 aa7.03□□□□□ -1.28
PGBD4-201ENST00000397766 TSHZ3Q63HK5 1081 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms