RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 A0A1B0GUL6 1792 aa20.63■□□□□ 0.89
CLTA-203ENST00000396603 TAF5LO75529 589 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 TAF7LQ5H9L4 462 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 PRAMEF18Q5VWM3 479 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 CERS5Q8N5B7 392 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 SRCIN1Q9C0H9 1055 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 DEFB129Q9H1M3 183 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
CLTA-203ENST00000396603 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
CLTA-203ENST00000396603 SCAF8Q9UPN6 1271 aaKnown RBP20.62■□□□□ 0.89
CLTA-203ENST00000396603 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
CLTA-203ENST00000396603 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
CLTA-203ENST00000396603 INHBEP58166 350 aa20.61■□□□□ 0.89
CLTA-203ENST00000396603 UBE4AQ14139 1066 aa20.61■□□□□ 0.89
CLTA-203ENST00000396603 CNNM1Q9NRU3 951 aa20.61■□□□□ 0.89
CLTA-203ENST00000396603 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
CLTA-203ENST00000396603 UTYO14607 1347 aa20.6■□□□□ 0.89
CLTA-203ENST00000396603 FAM205AQ6ZU69 1335 aa20.6■□□□□ 0.89
CLTA-203ENST00000396603 SPDYE2BA6NHP3 402 aa20.6■□□□□ 0.89
CLTA-203ENST00000396603 SPDYE6P0CI01 402 aa20.6■□□□□ 0.89
CLTA-203ENST00000396603 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
CLTA-203ENST00000396603 PPP1R12BO60237 982 aaPredicted RBP20.59■□□□□ 0.89
CLTA-203ENST00000396603 ZBTB48P10074 688 aaPredicted RBP20.59■□□□□ 0.89
CLTA-203ENST00000396603 PTPN12Q05209 780 aaKnown RBP20.59■□□□□ 0.89
CLTA-203ENST00000396603 EPHA10Q5JZY3 1008 aa20.59■□□□□ 0.89
CLTA-203ENST00000396603 HELBQ8NG08 1087 aaPredicted RBP20.59■□□□□ 0.89
CLTA-203ENST00000396603 ECM29Q5VYK3 1845 aa20.59■□□□□ 0.89
CLTA-203ENST00000396603 ZNF521Q96K83 1311 aa20.58■□□□□ 0.89
CLTA-203ENST00000396603 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
CLTA-203ENST00000396603 SNAP23O00161 211 aa20.58■□□□□ 0.89
CLTA-203ENST00000396603 CFAP100Q494V2 611 aa20.58■□□□□ 0.89
CLTA-203ENST00000396603 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
CLTA-203ENST00000396603 ANGEL1Q9UNK9 670 aaKnown RBP20.58■□□□□ 0.89
CLTA-203ENST00000396603 MROH5Q6ZUA9 1318 aa20.57■□□□□ 0.88
CLTA-203ENST00000396603 TNFAIP1Q13829 316 aa20.57■□□□□ 0.88
CLTA-203ENST00000396603 TDRD7Q8NHU6 1098 aaKnown RBP20.57■□□□□ 0.88
CLTA-203ENST00000396603 ZNF296Q8WUU4 475 aaPredicted RBP20.57■□□□□ 0.88
CLTA-203ENST00000396603 SERPINA10Q9UK55 444 aa20.57■□□□□ 0.88
CLTA-203ENST00000396603 GPR25O00155 361 aa20.56■□□□□ 0.88
CLTA-203ENST00000396603 RABL6Q3YEC7 729 aaPredicted RBP20.56■□□□□ 0.88
CLTA-203ENST00000396603 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
CLTA-203ENST00000396603 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
CLTA-203ENST00000396603 LAMB1P07942 1786 aa20.56■□□□□ 0.88
CLTA-203ENST00000396603 PTPRCP08575 1304 aa20.55■□□□□ 0.88
CLTA-203ENST00000396603 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
CLTA-203ENST00000396603 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
CLTA-203ENST00000396603 SLC10A4Q96EP9 437 aa20.55■□□□□ 0.88
CLTA-203ENST00000396603 PRMT6Q96LA8 375 aaPredicted RBP20.55■□□□□ 0.88
CLTA-203ENST00000396603 SSC5DA1L4H1 1573 aa20.55■□□□□ 0.88
CLTA-203ENST00000396603 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
CLTA-203ENST00000396603 KAZALD1Q96I82 304 aa20.54■□□□□ 0.88
CLTA-203ENST00000396603 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
CLTA-203ENST00000396603 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
CLTA-203ENST00000396603 RIPOR2Q9Y4F9 1068 aa20.54■□□□□ 0.88
CLTA-203ENST00000396603 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
CLTA-203ENST00000396603 FKTNO75072 461 aa20.53■□□□□ 0.88
CLTA-203ENST00000396603 IREB2P48200 963 aaKnown RBP20.53■□□□□ 0.88
CLTA-203ENST00000396603 MFSD14BQ5SR56 506 aa20.53■□□□□ 0.88
CLTA-203ENST00000396603 FAM84BQ96KN1 310 aaPredicted RBP20.53■□□□□ 0.88
CLTA-203ENST00000396603 ARAP2Q8WZ64 1704 aa20.53■□□□□ 0.88
CLTA-203ENST00000396603 PLIN1O60240 522 aa20.52■□□□□ 0.88
CLTA-203ENST00000396603 NBPF7P0C2Y1 421 aaPredicted RBP20.52■□□□□ 0.88
CLTA-203ENST00000396603 HDLBPQ00341 1268 aaKnown RBP20.52■□□□□ 0.88
CLTA-203ENST00000396603 PRKG1Q13976 671 aa20.52■□□□□ 0.88
CLTA-203ENST00000396603 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
CLTA-203ENST00000396603 FBXO46Q6PJ61 603 aaPredicted RBP20.52■□□□□ 0.88
CLTA-203ENST00000396603 ANKRD13AQ8IZ07 590 aa20.52■□□□□ 0.88
CLTA-203ENST00000396603 KIF16BQ96L93 1317 aa20.52■□□□□ 0.87
CLTA-203ENST00000396603 CLRN2A0PK11 232 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 SLC34A2O95436 690 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 RBM5P52756 815 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLTA-203ENST00000396603 RASA3Q14644 834 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 TBC1D22AQ8WUA7 517 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 WNK4Q96J92 1243 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 VEZTQ9HBM0 779 aa20.51■□□□□ 0.87
CLTA-203ENST00000396603 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
CLTA-203ENST00000396603 E9PSI1 815 aa20.5■□□□□ 0.87
CLTA-203ENST00000396603 MKRN3Q13064 507 aaKnown RBP20.5■□□□□ 0.87
CLTA-203ENST00000396603 FBXO33Q7Z6M2 555 aa20.5■□□□□ 0.87
CLTA-203ENST00000396603 IFNL1Q8IU54 200 aa20.5■□□□□ 0.87
CLTA-203ENST00000396603 MIER1Q8N108 512 aa20.5■□□□□ 0.87
CLTA-203ENST00000396603 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
CLTA-203ENST00000396603 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
CLTA-203ENST00000396603 PCDHAC2Q9Y5I4 1007 aa20.5■□□□□ 0.87
CLTA-203ENST00000396603 GYG1P46976 350 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 TNNI2P48788 182 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 CAVIN4Q5BKX8 364 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
CLTA-203ENST00000396603 OTUD7BQ6GQQ9 843 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 MRIQ9BWK5 157 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
CLTA-203ENST00000396603 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
CLTA-203ENST00000396603 TNRC18O15417 2968 aaPredicted RBP20.48■□□□□ 0.87
CLTA-203ENST00000396603 TESPA1A2RU30 521 aaPredicted RBP20.48■□□□□ 0.87
CLTA-203ENST00000396603 USP2O75604 605 aaPredicted RBP20.48■□□□□ 0.87
CLTA-203ENST00000396603 PDE8BO95263 885 aa20.48■□□□□ 0.87
CLTA-203ENST00000396603 SOX10P56693 466 aa20.48■□□□□ 0.87
CLTA-203ENST00000396603 VPS37DQ86XT2 251 aa20.48■□□□□ 0.87
CLTA-203ENST00000396603 DZIP1LQ8IYY4 767 aaKnown RBP20.48■□□□□ 0.87
CLTA-203ENST00000396603 VGLL2Q8N8G2 317 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms