RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PDIA3P30101 505 aaKnown RBP19.79■□□□□ 0.76
NUP50-202ENST00000396096 CCDC102BQ68D86 513 aa19.79■□□□□ 0.76
NUP50-202ENST00000396096 RNF214Q8ND24 703 aa19.79■□□□□ 0.76
NUP50-202ENST00000396096 ITPK1Q13572 414 aa19.79■□□□□ 0.76
NUP50-202ENST00000396096 FAM173BQ6P4H8 233 aa19.79■□□□□ 0.76
NUP50-202ENST00000396096 MB21D2Q8IYB1 491 aaPredicted RBP19.79■□□□□ 0.76
NUP50-202ENST00000396096 LEO1Q8WVC0 666 aaPredicted RBP19.79■□□□□ 0.76
NUP50-202ENST00000396096 PTPDC1A2A3K4 754 aa19.78■□□□□ 0.76
NUP50-202ENST00000396096 H3BQV1 296 aa19.78■□□□□ 0.76
NUP50-202ENST00000396096 IFFO2Q5TF58 517 aa19.78■□□□□ 0.76
NUP50-202ENST00000396096 SPATA32Q96LK8 384 aa19.78■□□□□ 0.76
NUP50-202ENST00000396096 PIH1D3Q9NQM4 214 aaKnown RBP19.78■□□□□ 0.76
NUP50-202ENST00000396096 PHKA1P46020 1223 aa19.77■□□□□ 0.76
NUP50-202ENST00000396096 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
NUP50-202ENST00000396096 DDX11Q96FC9 970 aa19.77■□□□□ 0.76
NUP50-202ENST00000396096 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
NUP50-202ENST00000396096 MCM5P33992 734 aa19.77■□□□□ 0.76
NUP50-202ENST00000396096 SLC5A1P13866 664 aa19.76■□□□□ 0.75
NUP50-202ENST00000396096 SLC9C2Q5TAH2 1124 aa19.76■□□□□ 0.75
NUP50-202ENST00000396096 NCOA7Q8NI08 942 aa19.76■□□□□ 0.75
NUP50-202ENST00000396096 TCRBV5S4A2TA0A5A2 114 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 ZNF213O14771 459 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 NTSR2O95665 410 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 HCLS1P14317 486 aaPredicted RBP19.75■□□□□ 0.75
NUP50-202ENST00000396096 CFAP45Q9UL16 551 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
NUP50-202ENST00000396096 PRC1O43663 620 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 PDE6AP16499 860 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 HAND2P61296 217 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 ATL3Q6DD88 541 aa19.75■□□□□ 0.75
NUP50-202ENST00000396096 TFIP11Q9UBB9 837 aaKnown RBP19.75■□□□□ 0.75
NUP50-202ENST00000396096 ZMYM6O95789 1325 aa19.74■□□□□ 0.75
NUP50-202ENST00000396096 CCT2P78371 535 aaKnown RBP19.74■□□□□ 0.75
NUP50-202ENST00000396096 GIMAP6Q6P9H5 292 aa19.74■□□□□ 0.75
NUP50-202ENST00000396096 CHST3Q7LGC8 479 aa19.74■□□□□ 0.75
NUP50-202ENST00000396096 ZNF532Q9HCE3 1301 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 LIG1P18858 919 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 ADD1P35611 737 aaKnown RBP19.73■□□□□ 0.75
NUP50-202ENST00000396096 ANTXR2P58335 489 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 ALX1Q15699 326 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 MPHOSPH8Q99549 860 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 NCOA5Q9HCD5 579 aaKnown RBP19.73■□□□□ 0.75
NUP50-202ENST00000396096 DDX19AQ9NUU7 478 aaKnown RBP19.73■□□□□ 0.75
NUP50-202ENST00000396096 CCDC39Q9UFE4 941 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 RALYLQ86SE5 291 aaKnown RBP19.73■□□□□ 0.75
NUP50-202ENST00000396096 SPATA5Q8NB90 893 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 NBPF3Q9H094 633 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 NUP62CLQ9H1M0 184 aa19.73■□□□□ 0.75
NUP50-202ENST00000396096 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 C4AP0C0L4 1744 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 C4BP0C0L5 1744 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 GOLGA6L4A6NEF3 574 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 RGL2O15211 777 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 IDH1O75874 414 aaKnown RBP19.72■□□□□ 0.75
NUP50-202ENST00000396096 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 CLEC4GQ6UXB4 293 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 RBM43Q6ZSC3 357 aaKnown RBP19.72■□□□□ 0.75
NUP50-202ENST00000396096 RGS22Q8NE09 1264 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 HELBQ8NG08 1087 aaPredicted RBP19.72■□□□□ 0.75
NUP50-202ENST00000396096 PGBD1Q96JS3 809 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 SEC31BQ9NQW1 1179 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 NIP7Q9Y221 180 aaKnown RBP eCLIP19.72■□□□□ 0.75
NUP50-202ENST00000396096 ZNF652Q9Y2D9 606 aa19.72■□□□□ 0.75
NUP50-202ENST00000396096 A0A1B0GUL6 1792 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 DHX16O60231 1041 aaKnown RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 MAP3K11Q16584 847 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 HPS5Q9UPZ3 1129 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 FDPSP14324 419 aaKnown RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 MSNP26038 577 aaKnown RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 IGHMBP2P38935 993 aaKnown RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 STRBPQ96SI9 672 aaKnown RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 GPHNQ9NQX3 736 aaPredicted RBP19.71■□□□□ 0.75
NUP50-202ENST00000396096 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
NUP50-202ENST00000396096 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
NUP50-202ENST00000396096 A0A0G2JS52 829 aa19.7■□□□□ 0.74
NUP50-202ENST00000396096 NUTM2BA6NNL0 878 aaPredicted RBP19.7■□□□□ 0.74
NUP50-202ENST00000396096 NUTM2EB1AL46 878 aaPredicted RBP19.7■□□□□ 0.74
NUP50-202ENST00000396096 RASGRF1Q13972 1273 aa19.7■□□□□ 0.74
NUP50-202ENST00000396096 NUTM2AQ8IVF1 878 aaPredicted RBP19.7■□□□□ 0.74
NUP50-202ENST00000396096 CLSTN2Q9H4D0 955 aa19.7■□□□□ 0.74
NUP50-202ENST00000396096 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.7■□□□□ 0.74
NUP50-202ENST00000396096 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
NUP50-202ENST00000396096 CASZ1Q86V15 1759 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 KLF18A0A0U1RQI7 1052 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 MAP3K12Q12852 859 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 ZNF396Q96N95 335 aaPredicted RBP19.69■□□□□ 0.74
NUP50-202ENST00000396096 DACT1Q9NYF0 836 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 NAP1L2Q9ULW6 460 aaPredicted RBP19.69■□□□□ 0.74
NUP50-202ENST00000396096 ZKSCAN5Q9Y2L8 839 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 CHD4Q14839 1912 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 SCN7AQ01118 1682 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 TRDNQ13061 729 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 TBC1D10CQ8IV04 446 aa19.69■□□□□ 0.74
NUP50-202ENST00000396096 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
NUP50-202ENST00000396096 GOLGA8BA8MQT2 603 aa19.68■□□□□ 0.74
NUP50-202ENST00000396096 ZNF500O60304 480 aaPredicted RBP19.68■□□□□ 0.74
NUP50-202ENST00000396096 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms