RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CDCA5Q96FF9 252 aa17.21■□□□□ 0.35
CXCL12-205ENST00000395794 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.35
CXCL12-205ENST00000395794 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.34
CXCL12-205ENST00000395794 PSME4Q14997 1843 aa17.2■□□□□ 0.34
CXCL12-205ENST00000395794 FOXN1O15353 648 aa17.2■□□□□ 0.34
CXCL12-205ENST00000395794 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
CXCL12-205ENST00000395794 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
CXCL12-205ENST00000395794 WNT10BO00744 389 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 SASH1O94885 1247 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 FKBP1AP62942 108 aaKnown RBP17.19■□□□□ 0.34
CXCL12-205ENST00000395794 DLGAP5Q15398 846 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 CAVIN4Q5BKX8 364 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
CXCL12-205ENST00000395794 F8W031 263 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-205ENST00000395794 AOC2O75106 756 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 FRAT2O75474 233 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-205ENST00000395794 PDE8BO95263 885 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 NF2P35240 595 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 GYG1P46976 350 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 NOGQ13253 232 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
CXCL12-205ENST00000395794 MYO1BO43795 1136 aa17.17■□□□□ 0.34
CXCL12-205ENST00000395794 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-205ENST00000395794 FKBP1BP68106 108 aa17.17■□□□□ 0.34
CXCL12-205ENST00000395794 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
CXCL12-205ENST00000395794 FAM84BQ96KN1 310 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-205ENST00000395794 PRDM10Q9NQV6 1147 aa17.17■□□□□ 0.34
CXCL12-205ENST00000395794 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
CXCL12-205ENST00000395794 EYA2O00167 538 aa17.16■□□□□ 0.34
CXCL12-205ENST00000395794 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
CXCL12-205ENST00000395794 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
CXCL12-205ENST00000395794 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
CXCL12-205ENST00000395794 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
CXCL12-205ENST00000395794 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-205ENST00000395794 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
CXCL12-205ENST00000395794 CA12O43570 354 aa17.15■□□□□ 0.34
CXCL12-205ENST00000395794 GNAI3P08754 354 aa17.15■□□□□ 0.34
CXCL12-205ENST00000395794 LBX1P52954 281 aa17.15■□□□□ 0.34
CXCL12-205ENST00000395794 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
CXCL12-205ENST00000395794 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
CXCL12-205ENST00000395794 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
CXCL12-205ENST00000395794 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
CXCL12-205ENST00000395794 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
CXCL12-205ENST00000395794 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
CXCL12-205ENST00000395794 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
CXCL12-205ENST00000395794 MTMR14Q8NCE2 650 aa17.14■□□□□ 0.33
CXCL12-205ENST00000395794 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
CXCL12-205ENST00000395794 SLC5A1P13866 664 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
CXCL12-205ENST00000395794 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
CXCL12-205ENST00000395794 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 FBXO33Q7Z6M2 555 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
CXCL12-205ENST00000395794 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 BCAR3O75815 825 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 CIAO1O76071 339 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 HSPA8P11142 646 aaKnown RBP17.12■□□□□ 0.33
CXCL12-205ENST00000395794 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-205ENST00000395794 LPIN2Q92539 896 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-205ENST00000395794 MEIS3Q99687 375 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 SIL1Q9H173 461 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
CXCL12-205ENST00000395794 TTF2Q9UNY4 1162 aaKnown RBP17.12■□□□□ 0.33
CXCL12-205ENST00000395794 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-205ENST00000395794 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 TRIM27P14373 513 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 BCAMP50895 628 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 DEFB129Q9H1M3 183 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 VEZTQ9HBM0 779 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
CXCL12-205ENST00000395794 THSD7BQ9C0I4 1608 aa17.1■□□□□ 0.33
CXCL12-205ENST00000395794 POLR2AP24928 1970 aaKnown RBP17.1■□□□□ 0.33
CXCL12-205ENST00000395794 FAM155AB1AL88 458 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-205ENST00000395794 UBE2Q2LH0YL09 131 aa17.1■□□□□ 0.33
CXCL12-205ENST00000395794 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-205ENST00000395794 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
CXCL12-205ENST00000395794 ARMC9Q7Z3E5 817 aa17.1■□□□□ 0.33
CXCL12-205ENST00000395794 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-205ENST00000395794 PPP2R3BQ9Y5P8 575 aa17.1■□□□□ 0.33
CXCL12-205ENST00000395794 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-205ENST00000395794 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
CXCL12-205ENST00000395794 SLC10A3P09131 477 aa17.09■□□□□ 0.33
CXCL12-205ENST00000395794 FGFR2P21802 821 aa17.09■□□□□ 0.33
CXCL12-205ENST00000395794 KIF23Q02241 960 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-205ENST00000395794 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
CXCL12-205ENST00000395794 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-205ENST00000395794 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
CXCL12-205ENST00000395794 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
CXCL12-205ENST00000395794 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-205ENST00000395794 ZBED9Q6R2W3 1325 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 GNAI2P04899 355 aa17.08■□□□□ 0.32
CXCL12-205ENST00000395794 TNFAIP1Q13829 316 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms