RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.4■■□□□ 1.5
COL11A2-204ENST00000395194 DLGAP5Q15398 846 aa24.39■■□□□ 1.49
COL11A2-204ENST00000395194 C15orf52Q6ZUT6 534 aaKnown RBP24.38■■□□□ 1.49
COL11A2-204ENST00000395194 SRCIN1Q9C0H9 1055 aa24.38■■□□□ 1.49
COL11A2-204ENST00000395194 MMP14P50281 582 aa24.37■■□□□ 1.49
COL11A2-204ENST00000395194 MLLT1Q03111 559 aaPredicted RBP24.37■■□□□ 1.49
COL11A2-204ENST00000395194 PTPN12Q05209 780 aaKnown RBP24.37■■□□□ 1.49
COL11A2-204ENST00000395194 SUCLG2Q96I99 432 aa24.37■■□□□ 1.49
COL11A2-204ENST00000395194 CLRN2A0PK11 232 aa24.36■■□□□ 1.49
COL11A2-204ENST00000395194 ALDH1L1O75891 902 aa24.36■■□□□ 1.49
COL11A2-204ENST00000395194 IL1R1P14778 569 aa24.36■■□□□ 1.49
COL11A2-204ENST00000395194 ARMC9Q7Z3E5 817 aa24.36■■□□□ 1.49
COL11A2-204ENST00000395194 REM2Q8IYK8 340 aaPredicted RBP24.36■■□□□ 1.49
COL11A2-204ENST00000395194 ANGEL1Q9UNK9 670 aaKnown RBP24.36■■□□□ 1.49
COL11A2-204ENST00000395194 AOX1Q06278 1338 aa24.35■■□□□ 1.49
COL11A2-204ENST00000395194 TBC1D8O95759 1140 aa24.35■■□□□ 1.49
COL11A2-204ENST00000395194 CFAP100Q494V2 611 aa24.35■■□□□ 1.49
COL11A2-204ENST00000395194 PUS3Q9BZE2 481 aaKnown RBP24.35■■□□□ 1.49
COL11A2-204ENST00000395194 NBPF7P0C2Y1 421 aaPredicted RBP24.34■■□□□ 1.49
COL11A2-204ENST00000395194 DEFB129Q9H1M3 183 aa24.34■■□□□ 1.49
COL11A2-204ENST00000395194 VEZTQ9HBM0 779 aa24.34■■□□□ 1.49
COL11A2-204ENST00000395194 ARAP2Q8WZ64 1704 aa24.33■■□□□ 1.49
COL11A2-204ENST00000395194 RGS19P49795 217 aa24.33■■□□□ 1.49
COL11A2-204ENST00000395194 RBM5P52756 815 aaKnown RBP eCLIP24.33■■□□□ 1.49
COL11A2-204ENST00000395194 KAZALD1Q96I82 304 aa24.33■■□□□ 1.49
COL11A2-204ENST00000395194 SSC5DA1L4H1 1573 aa24.33■■□□□ 1.48
COL11A2-204ENST00000395194 COL1A1P02452 1464 aaPredicted RBP24.32■■□□□ 1.48
COL11A2-204ENST00000395194 GYG1P46976 350 aa24.32■■□□□ 1.48
COL11A2-204ENST00000395194 ZNF521Q96K83 1311 aa24.32■■□□□ 1.48
COL11A2-204ENST00000395194 SPDYE2BA6NHP3 402 aa24.31■■□□□ 1.48
COL11A2-204ENST00000395194 SPDYE6P0CI01 402 aa24.31■■□□□ 1.48
COL11A2-204ENST00000395194 CTU1Q7Z7A3 348 aaKnown RBP24.31■■□□□ 1.48
COL11A2-204ENST00000395194 MTMR14Q8NCE2 650 aa24.31■■□□□ 1.48
COL11A2-204ENST00000395194 PRMT6Q96LA8 375 aaPredicted RBP24.31■■□□□ 1.48
COL11A2-204ENST00000395194 MYO1BO43795 1136 aa24.3■■□□□ 1.48
COL11A2-204ENST00000395194 SOX10P56693 466 aa24.3■■□□□ 1.48
COL11A2-204ENST00000395194 ZNF296Q8WUU4 475 aaPredicted RBP24.3■■□□□ 1.48
COL11A2-204ENST00000395194 BICC1Q9H694 974 aaKnown RBP24.3■■□□□ 1.48
COL11A2-204ENST00000395194 PDE4DIPQ5VU43 2346 aa24.29■■□□□ 1.48
COL11A2-204ENST00000395194 TM4SF4P48230 202 aa24.29■■□□□ 1.48
COL11A2-204ENST00000395194 FKBP1AP62942 108 aaKnown RBP24.29■■□□□ 1.48
COL11A2-204ENST00000395194 MFSD14BQ5SR56 506 aa24.29■■□□□ 1.48
COL11A2-204ENST00000395194 LDLRAD1Q5T700 205 aa24.29■■□□□ 1.48
COL11A2-204ENST00000395194 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
COL11A2-204ENST00000395194 CLMNQ96JQ2 1002 aa24.29■■□□□ 1.48
COL11A2-204ENST00000395194 TNRC18O15417 2968 aaPredicted RBP24.29■■□□□ 1.48
COL11A2-204ENST00000395194 HIBADHP31937 336 aaKnown RBP24.28■■□□□ 1.48
COL11A2-204ENST00000395194 SREBF2Q12772 1141 aa24.28■■□□□ 1.48
COL11A2-204ENST00000395194 UBE4AQ14139 1066 aa24.28■■□□□ 1.48
COL11A2-204ENST00000395194 FAM84BQ96KN1 310 aaPredicted RBP24.28■■□□□ 1.48
COL11A2-204ENST00000395194 IQSEC3Q9UPP2 1182 aaPredicted RBP24.28■■□□□ 1.48
COL11A2-204ENST00000395194 OTOFQ9HC10 1997 aa24.28■■□□□ 1.48
COL11A2-204ENST00000395194 LRRC24Q50LG9 513 aa24.27■■□□□ 1.48
COL11A2-204ENST00000395194 NBPF12Q5TAG4 269 aaPredicted RBP24.27■■□□□ 1.48
COL11A2-204ENST00000395194 SPRYD7Q5W111 196 aa24.27■■□□□ 1.48
COL11A2-204ENST00000395194 TDRD7Q8NHU6 1098 aaKnown RBP24.27■■□□□ 1.48
COL11A2-204ENST00000395194 TTF2Q9UNY4 1162 aaKnown RBP24.27■■□□□ 1.48
COL11A2-204ENST00000395194 FAM205AQ6ZU69 1335 aa24.27■■□□□ 1.48
COL11A2-204ENST00000395194 ANKRD44Q8N8A2 993 aa24.26■■□□□ 1.47
COL11A2-204ENST00000395194 SLC10A4Q96EP9 437 aa24.26■■□□□ 1.47
COL11A2-204ENST00000395194 R3HDMLQ9H3Y0 253 aa24.26■■□□□ 1.47
COL11A2-204ENST00000395194 RIPOR2Q9Y4F9 1068 aa24.26■■□□□ 1.47
COL11A2-204ENST00000395194 UTYO14607 1347 aa24.26■■□□□ 1.47
COL11A2-204ENST00000395194 GPR25O00155 361 aa24.25■■□□□ 1.47
COL11A2-204ENST00000395194 PPP1R12BO60237 982 aaPredicted RBP24.25■■□□□ 1.47
COL11A2-204ENST00000395194 KLHDC4Q8TBB5 520 aa24.25■■□□□ 1.47
COL11A2-204ENST00000395194 PPP2R3BQ9Y5P8 575 aa24.25■■□□□ 1.47
COL11A2-204ENST00000395194 CHAF1AQ13111 956 aaPredicted RBP24.24■■□□□ 1.47
COL11A2-204ENST00000395194 RASA3Q14644 834 aa24.24■■□□□ 1.47
COL11A2-204ENST00000395194 METTL24Q5JXM2 366 aa24.24■■□□□ 1.47
COL11A2-204ENST00000395194 SSH1Q8WYL5 1049 aa24.24■■□□□ 1.47
COL11A2-204ENST00000395194 MROH5Q6ZUA9 1318 aa24.24■■□□□ 1.47
COL11A2-204ENST00000395194 MYH13Q9UKX3 1938 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 GRIK5Q16478 980 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 MAP3K11Q16584 847 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 RABL6Q3YEC7 729 aaPredicted RBP24.23■■□□□ 1.47
COL11A2-204ENST00000395194 VPS37DQ86XT2 251 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 WNK4Q96J92 1243 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 TDRD3Q9H7E2 651 aaKnown RBP24.23■■□□□ 1.47
COL11A2-204ENST00000395194 ZNF70Q9UC06 446 aaPredicted RBP24.23■■□□□ 1.47
COL11A2-204ENST00000395194 HPS5Q9UPZ3 1129 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 LAMB1P07942 1786 aa24.23■■□□□ 1.47
COL11A2-204ENST00000395194 PTPRCP08575 1304 aa24.22■■□□□ 1.47
COL11A2-204ENST00000395194 E9PSI1 815 aa24.22■■□□□ 1.47
COL11A2-204ENST00000395194 SUPT20HL1Q3ZLR7 823 aa24.22■■□□□ 1.47
COL11A2-204ENST00000395194 SPDYE2Q495Y8 402 aa24.22■■□□□ 1.47
COL11A2-204ENST00000395194 CDAN1Q8IWY9 1227 aa24.21■■□□□ 1.47
COL11A2-204ENST00000395194 TCP10L2B9ZVM9 353 aa24.2■■□□□ 1.46
COL11A2-204ENST00000395194 FRAT2O75474 233 aaPredicted RBP24.2■■□□□ 1.46
COL11A2-204ENST00000395194 CRKP46108 304 aa24.2■■□□□ 1.46
COL11A2-204ENST00000395194 IREB2P48200 963 aaKnown RBP24.2■■□□□ 1.46
COL11A2-204ENST00000395194 DZIP1LQ8IYY4 767 aaKnown RBP24.2■■□□□ 1.46
COL11A2-204ENST00000395194 SERPINA10Q9UK55 444 aa24.2■■□□□ 1.46
COL11A2-204ENST00000395194 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
COL11A2-204ENST00000395194 FKTNO75072 461 aa24.19■■□□□ 1.46
COL11A2-204ENST00000395194 USP2O75604 605 aaPredicted RBP24.19■■□□□ 1.46
COL11A2-204ENST00000395194 FBXO33Q7Z6M2 555 aa24.19■■□□□ 1.46
COL11A2-204ENST00000395194 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
COL11A2-204ENST00000395194 IGF2BP3O00425 579 aaKnown RBP eCLIP24.18■■□□□ 1.46
COL11A2-204ENST00000395194 ZBTB48P10074 688 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms