RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ARL1P40616 181 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-204ENST00000391814 FANCCQ00597 558 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 TBCAO75347 108 aaKnown RBP18.21■□□□□ 0.51
SHANK1-204ENST00000391814 PEX19P40855 299 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 TUBB2AQ13885 445 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 TUBB2BQ9BVA1 445 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 RLBP1P12271 317 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 LIG3P49916 1009 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 RTN1Q16799 776 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 ATP5DP30049 168 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 WDR78Q5VTH9 848 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 FYB2Q5VWT5 728 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-204ENST00000391814 PROSER2Q86WR7 435 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-204ENST00000391814 CCDC26Q8TAB7 109 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 ANKRD24Q8TF21 1146 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 MRRFQ96E11 262 aaKnown RBP18.2■□□□□ 0.5
SHANK1-204ENST00000391814 CABS1Q96KC9 395 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 DNAI2Q9GZS0 605 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
SHANK1-204ENST00000391814 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 IFT20Q8IY31 132 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
SHANK1-204ENST00000391814 GDAP1L1Q96MZ0 367 aa18.2■□□□□ 0.5
SHANK1-204ENST00000391814 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 CPA1P15085 419 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 AP1ARQ63HQ0 302 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 GNGT1P63211 74 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 NME9Q86XW9 330 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 TPX2Q9ULW0 747 aaKnown RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 ELP1O95163 1332 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 CEP128Q6ZU80 1094 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 CRACR2BQ8N4Y2 399 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 IMPACTQ9P2X3 320 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 UTP11Q9Y3A2 253 aaKnown RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 PRG4Q92954 1404 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 BICDL2A1A5D9 508 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 CFAP157Q5JU67 520 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 MICAL1Q8TDZ2 1067 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 PPANQ9NQ55 473 aaKnown RBP18.19■□□□□ 0.5
SHANK1-204ENST00000391814 IL16Q14005 1332 aa18.19■□□□□ 0.5
SHANK1-204ENST00000391814 PLIN2Q99541 437 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 RAD50Q92878 1312 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 ZWINTO95229 277 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 ERCC3P19447 782 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 GOLGA5Q8TBA6 731 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 VCX3BQ9H321 246 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 VPS16Q9H269 839 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 ALDH3A1P30838 453 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 CA8P35219 290 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 CASQ2O14958 399 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-204ENST00000391814 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 HEATR3Q7Z4Q2 680 aa18.18■□□□□ 0.5
SHANK1-204ENST00000391814 BMP15O95972 392 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 GBP5Q96PP8 586 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 PLEKHA4Q9H4M7 779 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 NPHP3Q7Z494 1330 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 TXNDC9O14530 226 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 KRT2P35908 639 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
SHANK1-204ENST00000391814 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
SHANK1-204ENST00000391814 BICD1Q96G01 975 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 MCM7P33993 719 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 ERCC6LQ2NKX8 1250 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 GPR161Q8N6U8 529 aaKnown RBP18.17■□□□□ 0.5
SHANK1-204ENST00000391814 SYNCQ9H7C4 482 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 ERCC5P28715 1186 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-204ENST00000391814 CCDC38Q502W7 563 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 SEL1L2Q5TEA6 688 aa18.17■□□□□ 0.5
SHANK1-204ENST00000391814 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-204ENST00000391814 GBP7Q8N8V2 638 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-204ENST00000391814 FERMT1Q9BQL6 677 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 A6NNZ2 444 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 TUBB8Q3ZCM7 444 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 SND1Q7KZF4 910 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHANK1-204ENST00000391814 MCUR1Q96AQ8 359 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 EHMT1Q9H9B1 1298 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHANK1-204ENST00000391814 MUM1Q2TAK8 710 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 ARHGAP45Q92619 1136 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
SHANK1-204ENST00000391814 CALCOCO2Q13137 446 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 TTC19Q6DKK2 380 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-204ENST00000391814 TBC1D31Q96DN5 1066 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 KRT23Q9C075 422 aa18.15■□□□□ 0.5
SHANK1-204ENST00000391814 MTX1Q13505 466 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms