RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 GALNT11Q8NCW6 608 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 GLIS3Q8NEA6 775 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 ANKRD24Q8TF21 1146 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 CCDC74AQ96AQ1 378 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 HHIPQ96QV1 700 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 LATS2Q9NRM7 1088 aa4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 BIN2Q9UBW5 565 aaPredicted RBP4.36□□□□□ -1.71
RNU6-541P-201ENST00000384709 FSCN2O14926 492 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 TRPA1O75762 1119 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 MAPK1P28482 360 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 PIP4K2BP78356 416 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 PLCB3Q01970 1234 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 FOXD4L6Q3SYB3 417 aaPredicted RBP4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 FOXD4L3Q6VB84 417 aaPredicted RBP4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 FBF1Q8TES7 1133 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 NRSN2Q9GZP1 204 aa4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 MRPL18Q9H0U6 180 aaKnown RBP4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 SH2B1Q9NRF2 756 aaPredicted RBP4.35□□□□□ -1.71
RNU6-541P-201ENST00000384709 A0A096LPE4 126 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 A0A1W2PPZ6 126 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 LINC01387J3KSC0 135 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 SOX1O00570 391 aaPredicted RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 EIF4EBP3O60516 100 aaPredicted RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 POLR3DP05423 398 aaPredicted RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 ESRRAP11474 423 aaPredicted RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 GATA4P43694 442 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 GRIA4P48058 902 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 DNAJC14Q6Y2X3 702 aaPredicted RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 TXNRD3Q86VQ6 643 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 LACRTQ9GZZ8 138 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 LIN7BQ9HAP6 207 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 ABCB6Q9NP58 842 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 NPHS2Q9NP85 383 aa4.34□□□□□ -1.71
RNU6-541P-201ENST00000384709 MEGF11A6BM72 1044 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 F8W735 103 aaPredicted RBP4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 ERCC3P19447 782 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 CD68P34810 354 aaPredicted RBP4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 CABP4P57796 275 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 RPS26P11Q5JNZ5 115 aaPredicted RBP4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 FAM117BQ6P1L5 589 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 AEBP1Q8IUX7 1158 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 DZIP1LQ8IYY4 767 aaKnown RBP4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 KLHDC7BQ96G42 594 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 SEC31BQ9NQW1 1179 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 KCNK4Q9NYG8 393 aa4.33□□□□□ -1.72
RNU6-541P-201ENST00000384709 GIPC1O14908 333 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 ADAM11O75078 769 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 XRCC5P13010 732 aaKnown RBP4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 NOS3P29474 1203 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 GRM2Q14416 872 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 RSPO4Q2I0M5 234 aaPredicted RBP4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 ZNF423Q2M1K9 1284 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 NKAPLQ5M9Q1 402 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 WFDC12Q8WWY7 111 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 FOXD4L4Q8WXT5 416 aaPredicted RBP4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 SRCIN1Q9C0H9 1055 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 CLEC4MQ9H2X3 399 aaPredicted RBP4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 ZNF576Q9H609 170 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 TRAK1Q9UPV9 953 aa4.32□□□□□ -1.72
RNU6-541P-201ENST00000384709 PNMA6FA0A0J9YX94 578 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 TMEM238LA0A1B0GVL6 79 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 B3GALT4O96024 378 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 H2AFB1P0C5Y9 115 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 H2AFB2P0C5Z0 115 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 C19orf57Q0VDD7 668 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 SPRED3Q2MJR0 410 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 HGSNATQ68CP4 663 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 ALG1LQ6GMV1 187 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 KIAA1211Q6ZU35 1233 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 NPAS4Q8IUM7 802 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 TMC1Q8TDI8 760 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 EPS8L3Q8TE67 593 aaKnown RBP4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 FRMD6Q96NE9 622 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 EHD4Q9H223 541 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 AKTIPQ9H8T0 292 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 ZFYVE1Q9HBF4 777 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
RNU6-541P-201ENST00000384709 SYNGAP1Q96PV0 1343 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 FAM177BA6PVY3 158 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 METTL12A8MUP2 240 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 P4HBP07237 508 aaKnown RBP4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 ARL4DP49703 201 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 FGD1P98174 961 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 PCDH1Q08174 1060 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 IKBKEQ14164 716 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 TXNDC11Q6PKC3 985 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 HOMEZQ8IX15 550 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 C3orf58Q8NDZ4 430 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 MEGF10Q96KG7 1140 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 BCO2Q9BYV7 579 aa4.3□□□□□ -1.72
RNU6-541P-201ENST00000384709 WISP1O95388 367 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 ITGB7P26010 798 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 UVSSAQ2YD98 709 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 PI16Q6UXB8 463 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 FBXO33Q7Z6M2 555 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 ASAP3Q8TDY4 903 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 FAM46AQ96IP4 442 aaKnown RBP4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 TRIM56Q9BRZ2 755 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms