RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 EDN3P14138 238 aa5.27□□□□□ -1.57
SMC6-202ENST00000381272 ARHGAP4P98171 946 aa5.27□□□□□ -1.57
SMC6-202ENST00000381272 ECM1Q16610 540 aa5.27□□□□□ -1.57
SMC6-202ENST00000381272 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
SMC6-202ENST00000381272 DZANK1Q9NVP4 752 aa5.27□□□□□ -1.57
SMC6-202ENST00000381272 FOXD3Q9UJU5 478 aaPredicted RBP5.27□□□□□ -1.57
SMC6-202ENST00000381272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.27□□□□□ -1.57
SMC6-202ENST00000381272 LINC01387J3KSC0 135 aa5.26□□□□□ -1.57
SMC6-202ENST00000381272 PDE2AO00408 941 aaPredicted RBP5.26□□□□□ -1.57
SMC6-202ENST00000381272 ADAM19Q9H013 955 aa5.26□□□□□ -1.57
SMC6-202ENST00000381272 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
SMC6-202ENST00000381272 WDR97A6NE52 1622 aa5.26□□□□□ -1.57
SMC6-202ENST00000381272 CUL7Q14999 1698 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 TDRD9Q8NDG6 1382 aaKnown RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 NFKBIEO00221 500 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 BRD1O95696 1058 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 CDC25BP30305 580 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 CABP4P57796 275 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 PDE3BQ13370 1112 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 TXNDC11Q6PKC3 985 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 WFDC12Q8WWY7 111 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 CITED4Q96RK1 184 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 SH2B1Q9NRF2 756 aaPredicted RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 AMOTL2Q9Y2J4 779 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 URB2Q14146 1524 aaKnown RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 CASKIN1Q8WXD9 1431 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 FYCO1Q9BQS8 1478 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 NEFLP07196 543 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 ACPPP15309 386 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 EPHA1P21709 976 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 IREB2P48200 963 aaKnown RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 RSPO4Q2I0M5 234 aaPredicted RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 ADAMTSL4Q6UY14 1074 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 TMEM130Q8N3G9 435 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 OSMRQ99650 979 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 HIRIP3Q9BW71 556 aaPredicted RBP5.25□□□□□ -1.57
SMC6-202ENST00000381272 ZFYVE28Q9HCC9 887 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 EFCAB5A4FU69 1503 aa5.25□□□□□ -1.57
SMC6-202ENST00000381272 LRRIQ1Q96JM4 1722 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 FSCN2O14926 492 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 TRPA1O75762 1119 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 NOS3P29474 1203 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 CD68P34810 354 aaPredicted RBP5.24□□□□□ -1.57
SMC6-202ENST00000381272 DDX10Q13206 875 aaKnown RBP5.24□□□□□ -1.57
SMC6-202ENST00000381272 NKAPLQ5M9Q1 402 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 TMEM102Q8N9M5 508 aaPredicted RBP5.24□□□□□ -1.57
SMC6-202ENST00000381272 KLHL23Q8NBE8 558 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 GALNT11Q8NCW6 608 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 ZKSCAN3Q9BRR0 538 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 SEMA6BQ9H3T3 888 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 AKTIPQ9H8T0 292 aa5.24□□□□□ -1.57
SMC6-202ENST00000381272 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
SMC6-202ENST00000381272 H3BRJ5 948 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 WNT8BQ93098 351 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 NXPE3Q969Y0 559 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 TP53INP1Q96A56 240 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 HHIPQ96QV1 700 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 AQRO60306 1485 aaKnown RBP eCLIP5.23□□□□□ -1.574e-7■■■□□ 16.5
SMC6-202ENST00000381272 SOWAHDA6NJG2 315 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 H2AFB1P0C5Y9 115 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 H2AFB2P0C5Z0 115 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 PIP4K2BP78356 416 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 TMC1Q8TDI8 760 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 BSNDQ8WZ55 320 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 SSBP4Q9BWG4 385 aaPredicted RBP5.23□□□□□ -1.57
SMC6-202ENST00000381272 CARD10Q9BWT7 1032 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 SEC31BQ9NQW1 1179 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 LAMC3Q9Y6N6 1575 aa5.23□□□□□ -1.57
SMC6-202ENST00000381272 KIF21AQ7Z4S6 1674 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 MTUS2Q5JR59 1369 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 FMN1Q68DA7 1419 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 F8W735 103 aaPredicted RBP5.22□□□□□ -1.57
SMC6-202ENST00000381272 DYRK3O43781 588 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 PEAR1Q5VY43 1037 aaPredicted RBP5.22□□□□□ -1.57
SMC6-202ENST00000381272 FAM129BQ96TA1 746 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 LATS2Q9NRM7 1088 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 SOX13Q9UN79 622 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 GAPVD1Q14C86 1478 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 SNAPC4Q5SXM2 1469 aa5.22□□□□□ -1.57
SMC6-202ENST00000381272 PTPRKQ15262 1439 aa5.21□□□□□ -1.57
SMC6-202ENST00000381272 FGD6Q6ZV73 1430 aa5.21□□□□□ -1.57
SMC6-202ENST00000381272 ABCA5Q8WWZ7 1642 aa5.21□□□□□ -1.57
SMC6-202ENST00000381272 ALX3O95076 343 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 POLR3DP05423 398 aaPredicted RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 ARL4DP49703 201 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 FOXD4L6Q3SYB3 417 aaPredicted RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 FOXD4L3Q6VB84 417 aaPredicted RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 GALNT12Q8IXK2 581 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 ASAP3Q8TDY4 903 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 MEGF10Q96KG7 1140 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 BHLHE41Q9C0J9 482 aaPredicted RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 OSGEPQ9NPF4 335 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 BIN2Q9UBW5 565 aaPredicted RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 SUPT16HQ9Y5B9 1047 aaKnown RBP5.21□□□□□ -1.58
SMC6-202ENST00000381272 SAMD9Q5K651 1589 aa5.21□□□□□ -1.58
SMC6-202ENST00000381272 TM4SF5O14894 197 aa5.2□□□□□ -1.58
SMC6-202ENST00000381272 DUOXA2Q1HG44 320 aa5.2□□□□□ -1.58
SMC6-202ENST00000381272 DZIP1LQ8IYY4 767 aaKnown RBP5.2□□□□□ -1.58
SMC6-202ENST00000381272 SLC7A3Q8WY07 619 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms