RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
HMGN1-202ENST00000380747 TMEM57Q8N5G2 664 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 CAPNS2Q96L46 248 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 ZNRF3Q9ULT6 936 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 CA12O43570 354 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 PLIN1O60240 522 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 ECE2O60344 883 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 GNAI3P08754 354 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-202ENST00000380747 MAP2K2P36507 400 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 KCNJ4P48050 445 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-202ENST00000380747 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-202ENST00000380747 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
HMGN1-202ENST00000380747 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
HMGN1-202ENST00000380747 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-202ENST00000380747 TAF5LO75529 589 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 RAD17O75943 681 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 SCNN1DP51172 638 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 CLCN6P51797 869 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 CXCL9Q07325 125 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 KLHDC4Q8TBB5 520 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 LEMD3Q9Y2U8 911 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
HMGN1-202ENST00000380747 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 YDJCA8MPS7 323 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 RLBP1P12271 317 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 TNIP1Q15025 636 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 CIAPIN1Q6FI81 312 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 PANK1Q8TE04 598 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
HMGN1-202ENST00000380747 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
HMGN1-202ENST00000380747 GNAI2P04899 355 aa11.52□□□□□ -0.57
HMGN1-202ENST00000380747 LRRC24Q50LG9 513 aa11.52□□□□□ -0.57
HMGN1-202ENST00000380747 CST9Q5W186 159 aa11.52□□□□□ -0.57
HMGN1-202ENST00000380747 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
HMGN1-202ENST00000380747 PDE4DIPQ5VU43 2346 aa11.52□□□□□ -0.57
HMGN1-202ENST00000380747 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 SNAP23O00161 211 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 MS4A1P11836 297 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 KLRK1P26718 216 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 EPS15P42566 896 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-202ENST00000380747 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-202ENST00000380747 METTL24Q5JXM2 366 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 CYP4F22Q6NT55 531 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 TXNRD3Q86VQ6 643 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
HMGN1-202ENST00000380747 EYA2O00167 538 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 PSMD14O00487 310 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 SRGAP3O43295 1099 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-202ENST00000380747 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 SIL1Q9H173 461 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 ADARB2Q9NS39 739 aaKnown RBP11.5□□□□□ -0.57
HMGN1-202ENST00000380747 PGAP2Q9UHJ9 254 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 RIPOR2Q9Y4F9 1068 aa11.5□□□□□ -0.57
HMGN1-202ENST00000380747 TRPM7Q96QT4 1865 aa11.49□□□□□ -0.57
HMGN1-202ENST00000380747 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
HMGN1-202ENST00000380747 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■□□□□ 10.3
HMGN1-202ENST00000380747 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
HMGN1-202ENST00000380747 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
HMGN1-202ENST00000380747 GPRC5DQ9NZD1 345 aa11.49□□□□□ -0.57
HMGN1-202ENST00000380747 PA2G4Q9UQ80 394 aaKnown RBP11.49□□□□□ -0.57
HMGN1-202ENST00000380747 TRAF5O00463 557 aa11.48□□□□□ -0.57
HMGN1-202ENST00000380747 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-202ENST00000380747 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-202ENST00000380747 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-202ENST00000380747 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
HMGN1-202ENST00000380747 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
HMGN1-202ENST00000380747 MCOLN1Q9GZU1 580 aa11.48□□□□□ -0.57
HMGN1-202ENST00000380747 COG6Q9Y2V7 657 aa11.48□□□□□ -0.57
HMGN1-202ENST00000380747 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 AOC2O75106 756 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 CIAO1O76071 339 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 PDE8BO95263 885 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 MTX1Q13505 466 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 UBE4AQ14139 1066 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 MVPQ14764 893 aaKnown RBP11.47□□□□□ -0.57
HMGN1-202ENST00000380747 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-202ENST00000380747 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
HMGN1-202ENST00000380747 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
HMGN1-202ENST00000380747 CNOT7Q9UIV1 285 aaKnown RBP11.47□□□□□ -0.57
HMGN1-202ENST00000380747 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 PNMA6EA0A0J9YXQ4 647 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 H7C1D1 291 aa11.46□□□□□ -0.57
HMGN1-202ENST00000380747 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-202ENST00000380747 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
HMGN1-202ENST00000380747 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms