RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 STRIP1Q5VSL9 837 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 KIAA0825Q8IV33 1275 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 GPR108Q9NPR9 543 aa14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
DEPDC4-202ENST00000378244 POTECB2RU33 542 aa14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 SNRKQ9NRH2 765 aa14.4□□□□□ -0.11
DEPDC4-202ENST00000378244 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 RASGRF1Q13972 1273 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CCDC158Q5M9N0 1113 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 MFSD14BQ5SR56 506 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 CNOT7Q9UIV1 285 aaKnown RBP14.39□□□□□ -0.11
DEPDC4-202ENST00000378244 SCARF1Q14162 830 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 TTC39AQ5SRH9 613 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 C16orf71Q8IYS4 520 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 HACL1Q9UJ83 578 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
DEPDC4-202ENST00000378244 GRIK5Q16478 980 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 SAMD7Q7Z3H4 446 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 L3MBTL3Q96JM7 780 aaPredicted RBP14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 EGFRP00533 1210 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 POTEJP0CG39 1038 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 ABCF2Q9UG63 623 aa14.37□□□□□ -0.11
DEPDC4-202ENST00000378244 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 EPHX2P34913 555 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 MCAMP43121 646 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 OGFOD1Q8N543 542 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 HMG20BQ9P0W2 317 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 H7C1D1 291 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
DEPDC4-202ENST00000378244 COL1A1P02452 1464 aaPredicted RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 FAM205AQ6ZU69 1335 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 DPF2Q92785 391 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 GMLQ99445 158 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 DENND2AQ9ULE3 1009 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 SMC5Q8IY18 1101 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 TTF2Q9UNY4 1162 aaKnown RBP14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
DEPDC4-202ENST00000378244 KIF3CO14782 793 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 PRDX5P30044 214 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
DEPDC4-202ENST00000378244 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 WDR66Q8TBY9 1149 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.11
DEPDC4-202ENST00000378244 MYO3BQ8WXR4 1341 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 SEMA3EO15041 775 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 ZAP70P43403 619 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.12
DEPDC4-202ENST00000378244 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 CCDC136Q96JN2 1154 aa14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 EDC3Q96F86 508 aaKnown RBP14.32□□□□□ -0.12
DEPDC4-202ENST00000378244 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 NBPF9Q3BBW0 867 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ASTN2O75129 1339 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 CYP2E1P05181 493 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
DEPDC4-202ENST00000378244 ZNF280AP59817 542 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 NUCB1Q02818 461 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 MAP1SQ66K74 1059 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 GOLIM4O00461 696 aa14.3□□□□□ -0.12
DEPDC4-202ENST00000378244 MAP4K4O95819 1239 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms