RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 E9PCH4 1651 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 MAP3K15Q6ZN16 1313 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 PCCAP05165 728 aaPredicted RBP20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 BCAMP50895 628 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 CLIP2Q9UDT6 1046 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 ADCY5O95622 1261 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 DBNLQ9UJU6 430 aaKnown RBP20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 GGA1Q9UJY5 639 aa20.68■□□□□ 0.9
PTPDC1-202ENST00000375360 CTDSPL2Q05D32 466 aa20.67■□□□□ 0.9
PTPDC1-202ENST00000375360 HSPA4P34932 840 aa20.67■□□□□ 0.9
PTPDC1-202ENST00000375360 QTRT2Q9H974 415 aaKnown RBP20.67■□□□□ 0.9
PTPDC1-202ENST00000375360 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
PTPDC1-202ENST00000375360 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
PTPDC1-202ENST00000375360 NAPAP54920 295 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 ENOX2Q16206 610 aaKnown RBP20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 SYCP1Q15431 976 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 SPTLC2O15270 562 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 GPS2Q13227 327 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 COPRSQ9NQ92 184 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 IBSPP21815 317 aaPredicted RBP20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 ADORA1P30542 326 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 KCNG4Q8TDN1 519 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 MRPS27Q92552 414 aaKnown RBP20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 CEP152O94986 1710 aa20.66■□□□□ 0.9
PTPDC1-202ENST00000375360 HDAC9Q9UKV0 1011 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 ANKARQ7Z5J8 1434 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 CCDC112Q8NEF3 446 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 JDP2Q8WYK2 163 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 SEPT11Q9NVA2 429 aaKnown RBP20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 PLCG2P16885 1265 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 GNAQP50148 359 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 LRSAM1Q6UWE0 723 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 EYA3Q99504 573 aa20.65■□□□□ 0.9
PTPDC1-202ENST00000375360 TOP1P11387 765 aaKnown RBP20.64■□□□□ 0.9
PTPDC1-202ENST00000375360 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.9
PTPDC1-202ENST00000375360 TRMT1Q9NXH9 659 aaKnown RBP20.64■□□□□ 0.9
PTPDC1-202ENST00000375360 STK32BQ9NY57 414 aa20.64■□□□□ 0.9
PTPDC1-202ENST00000375360 MROH5Q6ZUA9 1318 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 JAK2O60674 1132 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 STX1AQ16623 288 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 NBPF14Q5TI25 921 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 ARGLU1Q9NWB6 273 aaPredicted RBP20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 SEC31BQ9NQW1 1179 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 ANGEL1Q9UNK9 670 aaKnown RBP20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 MADDQ8WXG6 1647 aa20.64■□□□□ 0.89
PTPDC1-202ENST00000375360 TRIM75PA6NK02 468 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 TRIM37O94972 964 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 PHKA1P46020 1223 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 CALML4Q96GE6 196 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 DNAJC25Q9H1X3 360 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 EPB41L2O43491 1005 aaKnown RBP20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 TNIP1Q15025 636 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 ANO6Q4KMQ2 910 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 PRM3Q9NNZ6 103 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 hCG_1642624A0A1W2PR95 340 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 PHKBQ93100 1093 aa20.63■□□□□ 0.89
PTPDC1-202ENST00000375360 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 MATR3P43243 847 aaKnown RBP eCLIP20.62■□□□□ 0.891e-7■■■□□ 15.4
PTPDC1-202ENST00000375360 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 SAMM50Q9Y512 469 aa20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 ADGRB3O60242 1522 aa20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 CROCC2H7BZ55 1655 aa20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 CCP110O43303 1012 aa20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 ZNF830Q96NB3 372 aaPredicted RBP20.62■□□□□ 0.89
PTPDC1-202ENST00000375360 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 MAPKAPK5Q8IW41 473 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 ARHGAP29Q52LW3 1261 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 V9GY48 417 aaPredicted RBP20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 PDE8BO95263 885 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 POLD1P28340 1107 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 TMC6Q7Z403 805 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 DHX58Q96C10 678 aa20.61■□□□□ 0.89
PTPDC1-202ENST00000375360 E7EWF7 191 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 RASEFQ8IZ41 740 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 ABCA6Q8N139 1617 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 A0A1B0GVL5 298 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 TNNI2P48788 182 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 TTC6Q86TZ1 520 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 WDR66Q8TBY9 1149 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 LIG1P18858 919 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
PTPDC1-202ENST00000375360 PRKCSHP14314 528 aaPredicted RBP20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CHRNDQ07001 517 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 TCP10Q12799 353 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CCDC148Q8NFR7 591 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 ANTXR1Q9H6X2 564 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 GTF2IP78347 998 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CHAMP1Q96JM3 812 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 PDE6AP16499 860 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 MCM7P33993 719 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 PLIN2Q99541 437 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 HAUS7Q99871 368 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 USP17L12C9JPN9 530 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 USP17L21D6R901 530 aa20.59■□□□□ 0.89
PTPDC1-202ENST00000375360 CALM1P0DP23 149 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms