RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
CXCL12-202ENST00000374426 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 SPRYD7Q5W111 196 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 MTMR14Q8NCE2 650 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
CXCL12-202ENST00000374426 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
CXCL12-202ENST00000374426 COL1A1P02452 1464 aaPredicted RBP17.55■□□□□ 0.4
CXCL12-202ENST00000374426 IL1R1P14778 569 aa17.54■□□□□ 0.4
CXCL12-202ENST00000374426 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
CXCL12-202ENST00000374426 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
CXCL12-202ENST00000374426 R3HDMLQ9H3Y0 253 aa17.54■□□□□ 0.4
CXCL12-202ENST00000374426 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-202ENST00000374426 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
CXCL12-202ENST00000374426 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
CXCL12-202ENST00000374426 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
CXCL12-202ENST00000374426 F8W031 263 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-202ENST00000374426 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
CXCL12-202ENST00000374426 ZNF594Q96JF6 807 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-202ENST00000374426 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
CXCL12-202ENST00000374426 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
CXCL12-202ENST00000374426 FKBP1AP62942 108 aaKnown RBP17.52■□□□□ 0.4
CXCL12-202ENST00000374426 MAP3K11Q16584 847 aa17.52■□□□□ 0.4
CXCL12-202ENST00000374426 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
CXCL12-202ENST00000374426 JAG2Q9Y219 1238 aa17.52■□□□□ 0.4
CXCL12-202ENST00000374426 CENPFP49454 3210 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 AOX1Q06278 1338 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 GRM8O00222 908 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 PRMT6Q96LA8 375 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-202ENST00000374426 PPP2R3BQ9Y5P8 575 aa17.51■□□□□ 0.39
CXCL12-202ENST00000374426 PLIN1O60240 522 aa17.5■□□□□ 0.39
CXCL12-202ENST00000374426 FKTNO75072 461 aa17.5■□□□□ 0.39
CXCL12-202ENST00000374426 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
CXCL12-202ENST00000374426 MKI67P46013 3256 aaKnown RBP17.5■□□□□ 0.39
CXCL12-202ENST00000374426 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-202ENST00000374426 MYO1BO43795 1136 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 PPP1R12BO60237 982 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-202ENST00000374426 ALDH1A1P00352 501 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 FBXO46Q6PJ61 603 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-202ENST00000374426 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
CXCL12-202ENST00000374426 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
CXCL12-202ENST00000374426 ZBTB48P10074 688 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-202ENST00000374426 INHBEP58166 350 aa17.48■□□□□ 0.39
CXCL12-202ENST00000374426 SUPT20HL1Q3ZLR7 823 aa17.48■□□□□ 0.39
CXCL12-202ENST00000374426 NBPF12Q5TAG4 269 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-202ENST00000374426 IFNL1Q8IU54 200 aa17.48■□□□□ 0.39
CXCL12-202ENST00000374426 WNK4Q96J92 1243 aa17.48■□□□□ 0.39
CXCL12-202ENST00000374426 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-202ENST00000374426 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXCL12-202ENST00000374426 RBM5P52756 815 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXCL12-202ENST00000374426 RASA3Q14644 834 aa17.47■□□□□ 0.39
CXCL12-202ENST00000374426 TDRD7Q8NHU6 1098 aaKnown RBP17.47■□□□□ 0.39
CXCL12-202ENST00000374426 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-202ENST00000374426 UNCXA6NJT0 531 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-202ENST00000374426 ALDH1L1O75891 902 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 GYG1P46976 350 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 MFSD14BQ5SR56 506 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 SUCLG2Q96I99 432 aa17.46■□□□□ 0.39
CXCL12-202ENST00000374426 PUS3Q9BZE2 481 aaKnown RBP17.46■□□□□ 0.39
CXCL12-202ENST00000374426 BRCA2P51587 3418 aa17.46■□□□□ 0.38
CXCL12-202ENST00000374426 ANP32CO43423 234 aa17.45■□□□□ 0.38
CXCL12-202ENST00000374426 GJA5P36382 358 aa17.45■□□□□ 0.38
CXCL12-202ENST00000374426 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
CXCL12-202ENST00000374426 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-202ENST00000374426 SRCIN1Q9C0H9 1055 aa17.45■□□□□ 0.38
CXCL12-202ENST00000374426 LAMB1P07942 1786 aa17.44■□□□□ 0.38
CXCL12-202ENST00000374426 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
CXCL12-202ENST00000374426 IREB2P48200 963 aaKnown RBP17.44■□□□□ 0.38
CXCL12-202ENST00000374426 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
CXCL12-202ENST00000374426 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
CXCL12-202ENST00000374426 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-202ENST00000374426 SERPINA10Q9UK55 444 aa17.44■□□□□ 0.38
CXCL12-202ENST00000374426 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
CXCL12-202ENST00000374426 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-202ENST00000374426 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
CXCL12-202ENST00000374426 ANKRD13AQ8IZ07 590 aa17.43■□□□□ 0.38
CXCL12-202ENST00000374426 TDRD3Q9H7E2 651 aaKnown RBP17.43■□□□□ 0.38
CXCL12-202ENST00000374426 RIPOR2Q9Y4F9 1068 aa17.43■□□□□ 0.38
CXCL12-202ENST00000374426 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
CXCL12-202ENST00000374426 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
CXCL12-202ENST00000374426 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
CXCL12-202ENST00000374426 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
CXCL12-202ENST00000374426 TEPSINQ96N21 525 aa17.42■□□□□ 0.38
CXCL12-202ENST00000374426 PTPN18Q99952 460 aa17.42■□□□□ 0.38
CXCL12-202ENST00000374426 UTYO14607 1347 aa17.42■□□□□ 0.38
CXCL12-202ENST00000374426 CRHR2Q13324 411 aa17.41■□□□□ 0.38
CXCL12-202ENST00000374426 GRIK5Q16478 980 aa17.41■□□□□ 0.38
CXCL12-202ENST00000374426 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
CXCL12-202ENST00000374426 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
CXCL12-202ENST00000374426 KIAA0100Q14667 2235 aaKnown RBP17.4■□□□□ 0.38
CXCL12-202ENST00000374426 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms